Non-Coding RNA Search

Ss1.1-mAY1-MI-P-AY1-nqf-f-02-0-UI.s1.3

Sequence:


               
               AGCTGCAGCTGCACCAATGCCAAATCCTTAACTCACTGTGTGGGGCCGGGATTTGAACCT
ACATCCCAGGGCTCCCAAGATGCCACTGATCTCGTTGCACCAGAGCAGGAACTCCCCATC
CTTAGATTTTGATGGGTTGCCCACTCTCACTTTGGTTGCTTCAGAGAGGGATTTGAATGT
TTCTACCCCAGGCATAGGTCCAGCCTTTCCAAGGGGGAGCCTCCCTATTTGGAGGAGGTT
CAAGTGCCCGCTCCACTGCTCTAGACCCACACTTATGCTTTTATATCTGGTTCTCACTCT
CCTGGCCCAGGGATGGGTGTTGGTGTGCCCAGCCTGACTCCCTAGCAAGGGTTGGGTTGG
CATGTAAAGGAGACGGTCCATTCCAGCCCTTGGAATACAGAACTATTCTGACACTGAATT
TTTGATGCACCTGATTTTGTATAATAAATTGTTTCACACCTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTGCAGCTGCACCAATGCCAAATCCTTAACTCACTGTGTGGGGCCGGGATTTGAACCT
ACATCCCAGGGCTCCCAAGATGCCACTGATCTCGTTGCACCAGAGCAGGAACTCCCCATC
CTTAGATTTTGATGGGTTGCCCACTCTCACTTTGGTTGCTTCAGAGAGGGATTTGAATGT
TTCTACCCCAGGCATAGGTCCAGCCTTTCCAAGGGGGAGCCTCCCTATTTGGAGGAGGTT
CAAGTGCCCGCTCCACTGCTCTAGACCCACACTTATGCTTTTATATCTGGTTCTCACTCT
CCTGGCCCAGGGATGGGTGTTGGTGTGCCCAGCCTGACTCCCTAGCAAGGGTTGGGTTGG
CATGTAAAGGAGACGGTCCATTCCAGCCCTTGGAATACAGAACTATTCTGACACTGAATT
TTTGATGCACCTGATTTTGTATAATAAATTGTTTCACACCTGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               114-462, gnl|bosTau2|chr25 (22856976-22857323)
               

               
               114-462, gnl|Hg17|chr16 (30873354-30873762)
               

               
               114-462, gnl|Mm7|chr7 (123871158-123871568)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               114-462, gnl|bosTau2|chr25 (22856976-22857323)
               

               
               114-462, gnl|Hg17|chr16 (30873354-30873762)
               

               
               114-462, gnl|Mm7|chr7 (123871158-123871568)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	114-462, gnl\|bosTau2\|chr25 (22856976-22857323)
	114-462, gnl\|Hg17\|chr16 (30873354-30873762)
	114-462, gnl\|Mm7\|chr7 (123871158-123871568)