Non-Coding RNA Search

Ss1.1-mAY1-MI-P-AY1-nqh-d-08-0-UI.s1.3

Sequence:


               
               GCAGTTTTTTTTTGTTTTTTTTTTAGCACAATAAATTTTAATTGCAAAAATAAACAGTTT
TGTCAACTGCTTGAGAGTAGCGTCTGCTTTACAAAAATTAACAACAACAAAAAGGAAATA
ACCCCAAAGCAAAACGTTACAACCAATGGCTGCTGAAAACGACATTGCTGTACAAAATCC
CGCGCGAGACCAGCTCGGCGCTGCCCCAGCCTATCTCTGGGGGGGGGGGGCTAAGAGAGG
GCGTGGGGTGTGCGCCAGTTACAAAAGATTGTATTAAGTCCCAGGGATGTGCCTACTCAG
TGGGTGAGAGCGCATCCTTCTGTAGCGCGTCTGACTCGGAGACTGCGCCGGGACCGCGGG
AGCTGTCCAGAAAGCTGGTGCTGAACAAGGCGTGTGCGGCGGGCGCTTCAAGGGAACTGG
AAGCCGGACTAGAGGCCCGCCCCAGGGCGTGCCGGGAAGAAGTAGGAAAGAGAGCGGAGA
GCGGGGGCGGGCCAGGTTTTCTCTTGCGCGCCAGGCGGCGGCGCCCCAATCTACAAACCC
ATTTCACCCTTACAGGGCGGCGAAGGAGAGGCCCAACGAGTAAAAGCCAAGGCCCTTGAG
CCGCTCCTCGGCGCGCGCCTTCTGCTTGAGGTGCACCTTGCTGTGCCGTTTCTTCTCATC
NACTGCGCGCGAAGCGGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGTTTTTTTTTGTTTTTTTTTTAGCACAATAAATTTTAATTGCAAAAATAAACAGTTT
TGTCAACTGCTTGAGAGTAGCGTCTGCTTTACAAAAATTAACAACAACAAAAAGGAAATA
ACCCCAAAGCAAAACGTTACAACCAATGGCTGCTGAAAACGACATTGCTGTACAAAATCC
CGCGCGAGACCAGCTCGGCGCTGCCCCAGCCTATCTCTGGGGGGGGGGGGCTAAGAGAGG
GCGTGGGGTGTGCGCCAGTTACAAAAGATTGTATTAAGTCCCAGGGATGTGCCTACTCAG
TGGGTGAGAGCGCATCCTTCTGTAGCGCGTCTGACTCGGAGACTGCGCCGGGACCGCGGG
AGCTGTCCAGAAAGCTGGTGCTGAACAAGGCGTGTGCGGCGGGCGCTTCAAGGGAACTGG
AAGCCGGACTAGAGGCCCGCCCCAGGGCGTGCCGGGAAGAAGTAGGAAAGAGAGCGGAGA
GCGGGGGCGGGCCAGGTTTTCTCTTGCGCGCCAGGCGGCGGCGCCCCAATCTACAAACCC
ATTTCACCCTTACAGGGCGGCGAAGGAGAGGCCCAACGAGTAAAAGCCAAGGCCCTTGAG
CCGCTCCTCGGCGCGCGCCTTCTGCTTGAGGTGCACCTTGCTGTGCCGTTTCTTCTCATC
NACTGCGCGCGAAGCGGCGGCCGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               21-684, gnl|bosTau2|chr11 (8977768-8978430)
               

               
               21-684, gnl|Hg17|chr2 (73429717-73430373)
               

               
               21-684, gnl|Mm7|chr6 (85540771-85541418)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-684, gnl|bosTau2|chr11 (8977768-8978430)
               

               
               21-684, gnl|Hg17|chr2 (73429717-73430373)
               

               
               21-684, gnl|Mm7|chr6 (85540771-85541418)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	21-684, gnl\|bosTau2\|chr11 (8977768-8978430)
	21-684, gnl\|Hg17\|chr2 (73429717-73430373)
	21-684, gnl\|Mm7\|chr6 (85540771-85541418)