Non-Coding RNA Search

Ss1.1-mAY1-MI-P-AY1-nqo-d-04-0-UI.s1.3

Sequence:


               
               CGCGGGCGTCGCCGGCCCGGCAGGCGCCGGGGCCGAGCTTCGCGGCCGCGGAGGCAGGTA
GAGCTCTACCATCCAGAAAGGCGGCACAGGGCCAGGCCTCGCCCATGGACCCTGCCCAGG
ACCACCTGCCAGCACCAGCGGGGCCGCGCTCCTGAGCCACCGGGGGCCTGGGCTCACTCT
CCTTCCAGAGGAGCCATGGTGTCTAGGAGGGGCAGGGGCAGCCCCCTGTGGTGGCCTGGC
CCGGGAGGGGGCGGTGGTCACACGGGCCCCGCAGGCGTGCTCGGGGCTGCCCTGCTGCTC
GCCAGCCTGCCGTGGGGGGCCCAGGGAACAGCCGGTGCCCACCCCAGCGCGGCTCTGGGC
CGGGCCGTGCCTCTGGCCAGGGGCCGCTACTTGAGCATCGGCGACGGCTCCGTGATGGAG
TTTGAGTTCCCAGAGGAGAGCGAGGGCATCATCGTGATCTCAAGCCAGTACCCGGGCCGG
GGCAACGGCACGGGGCCCGGCCCCGCGCTCCAGGTCACCTCCCTGGACACAGAGGTGCTG
GCCATCAAGAATGTGAGTGCCATCACGTGGGGCGGGGGGGGGGGCTTCGTGGTGAGCATC
CACTCAGGCCTGCCTGGCCTGGCCCCCCTCTACATCCAGCTCGTGGACCCCCACGAGGCC
CCGCCCAAACTGATCGAGGAGCGGAGAGATTTCCGCATCAAGGTCTCGCCCGCCGAAGAC
CCCCCCGCCACCCTCGGCGCCGGCCTGGCTCACTTCTCGGAGAACCCCATCCTCTACCTG
CTCCTGCCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGGGCGTCGCCGGCCCGGCAGGCGCCGGGGCCGAGCTTCGCGGCCGCGGAGGCAGGTA
GAGCTCTACCATCCAGAAAGGCGGCACAGGGCCAGGCCTCGCCCATGGACCCTGCCCAGG
ACCACCTGCCAGCACCAGCGGGGCCGCGCTCCTGAGCCACCGGGGGCCTGGGCTCACTCT
CCTTCCAGAGGAGCCATGGTGTCTAGGAGGGGCAGGGGCAGCCCCCTGTGGTGGCCTGGC
CCGGGAGGGGGCGGTGGTCACACGGGCCCCGCAGGCGTGCTCGGGGCTGCCCTGCTGCTC
GCCAGCCTGCCGTGGGGGGCCCAGGGAACAGCCGGTGCCCACCCCAGCGCGGCTCTGGGC
CGGGCCGTGCCTCTGGCCAGGGGCCGCTACTTGAGCATCGGCGACGGCTCCGTGATGGAG
TTTGAGTTCCCAGAGGAGAGCGAGGGCATCATCGTGATCTCAAGCCAGTACCCGGGCCGG
GGCAACGGCACGGGGCCCGGCCCCGCGCTCCAGGTCACCTCCCTGGACACAGAGGTGCTG
GCCATCAAGAATGTGAGTGCCATCACGTGGGGCGGGGGGGGGGGCTTCGTGGTGAGCATC
CACTCAGGCCTGCCTGGCCTGGCCCCCCTCTACATCCAGCTCGTGGACCCCCACGAGGCC
CCGCCCAAACTGATCGAGGAGCGGAGAGATTTCCGCATCAAGGTCTCGCCCGCCGAAGAC
CCCCCCGCCACCCTCGGCGCCGGCCTGGCTCACTTCTCGGAGAACCCCATCCTCTACCTG
CTCCTGCCTCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57284177|emb|CAI43237.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57284177|emb|CAI43237.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               55-791, gnl|bosTau2|chrX (14684043-14684779)
               

               
               55-791, gnl|Hg17|chrX (153281128-153280388)
               

               
               55-791, gnl|Mm7|chrX (69757663-69756938)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               55-791, gnl|bosTau2|chrX (14684043-14684779)
               

               
               55-791, gnl|Hg17|chrX (153281128-153280388)
               

               
               55-791, gnl|Mm7|chrX (69757663-69756938)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nco (0.161734)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               nmm (0.132802)

	55-791, gnl\|bosTau2\|chrX (14684043-14684779)
	55-791, gnl\|Hg17\|chrX (153281128-153280388)
	55-791, gnl\|Mm7\|chrX (69757663-69756938)