Non-Coding RNA Search

Ss1.1-mAY1-MI-P-AY1-nrk-e-02-0-UI.s1.3

Sequence:


               
               AATTGCATAAGTTAAATTTTCAATTAACTGAGGCAAATCCATTTAATCATTAATTTTTAA
ACAATTTTATAAGAAATAGTCTAAGTATTTCTACTTACCATTTTTTCTTTGTCATCTTCA
AGAGCATAACTTCCTGTCATGGGTGATAAATAGAAATCACCCTCAGGGGCTACTGAGATA
TATAATGCCCCTTTCTATGTGACCTTGCATTGCTGTGCTTTTTGAGTTATGTCTGTTTTT
CATAGTTTCTCTATTTTCCCTTATAATCAGCTGTCACTTTTTTGCTGCTGTCTTGTATGC
CTGCCTCCTGCATTAGGCCCCTAATTTGCTGCTTCTAATCTGCTGTGGACTGAGAAACCA
GACTGCCAAGCTTGCTAAACTGTGTCTGAAATAAGAGTAAGTAGACTGAACAAAGGCTAA
GGGGCTTTTCTGTCAGTAAAGTGCATGGACTTTGTGGTACCTGTTTGGCTGCTTAACATA
CTTTTTTTGGTTTGTTTATTAGTTCTTTACTAAGAATCTGCTAAAAAATACTTGGTTGAA
TGTGTTATTGCCATATATTTAAAGTATTTCATCAGTTTTTATATGGTGATATTTCTAGGA
CTCTCCATTAATGAATTCAGCTATACAAGAAAATGTGACTGTCATCTTTATACAGATCGT
TGTGTGTATTTTAGGGAAATGTTGTATAGTTTGTTCTTGCTAAATATTCTAGGATAGTAT
ACATACATAAAACTTAAAGCACTGTAAATAGAATTCAACTCTGCTCACCAAAATATATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTGCATAAGTTAAATTTTCAATTAACTGAGGCAAATCCATTTAATCATTAATTTTTAA
ACAATTTTATAAGAAATAGTCTAAGTATTTCTACTTACCATTTTTTCTTTGTCATCTTCA
AGAGCATAACTTCCTGTCATGGGTGATAAATAGAAATCACCCTCAGGGGCTACTGAGATA
TATAATGCCCCTTTCTATGTGACCTTGCATTGCTGTGCTTTTTGAGTTATGTCTGTTTTT
CATAGTTTCTCTATTTTCCCTTATAATCAGCTGTCACTTTTTTGCTGCTGTCTTGTATGC
CTGCCTCCTGCATTAGGCCCCTAATTTGCTGCTTCTAATCTGCTGTGGACTGAGAAACCA
GACTGCCAAGCTTGCTAAACTGTGTCTGAAATAAGAGTAAGTAGACTGAACAAAGGCTAA
GGGGCTTTTCTGTCAGTAAAGTGCATGGACTTTGTGGTACCTGTTTGGCTGCTTAACATA
CTTTTTTTGGTTTGTTTATTAGTTCTTTACTAAGAATCTGCTAAAAAATACTTGGTTGAA
TGTGTTATTGCCATATATTTAAAGTATTTCATCAGTTTTTATATGGTGATATTTCTAGGA
CTCTCCATTAATGAATTCAGCTATACAAGAAAATGTGACTGTCATCTTTATACAGATCGT
TGTGTGTATTTTAGGGAAATGTTGTATAGTTTGTTCTTGCTAAATATTCTAGGATAGTAT
ACATACATAAAACTTAAAGCACTGTAAATAGAATTCAACTCTGCTCACCAAAATATATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-778, gnl|bosTau2|chr5 (17289232-17288473)
               

               
               3-778, gnl|Hg17|chr12 (94200253-94201040)
               

               
               3-778, gnl|Mm7|chr10 (93526151-93525512)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-778, gnl|bosTau2|chr5 (17289232-17288473)
               

               
               3-778, gnl|Hg17|chr12 (94200253-94201040)
               

               
               3-778, gnl|Mm7|chr10 (93526151-93525512)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	3-778, gnl\|bosTau2\|chr5 (17289232-17288473)
	3-778, gnl\|Hg17\|chr12 (94200253-94201040)
	3-778, gnl\|Mm7\|chr10 (93526151-93525512)