Ss1.1-mAY1-MI-P-AY1-nrq-g-05-0-UI.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGGGGCCGGGATGCCCACTTTTCTATATTTATTGCGAAAAGAAGTCTCCTACGGGAGTG GAAATGCAGTCCGGCCCAGGGCTCCCAGTGCTGGGACTGTCCTCCCGTGAGGGCCTCACC TCAGCCCCTCGGCCGGCAGCCGGGCCACCTCGCGCGGTCCTCCGCCTCCTCGTCAAGCAA TATCCTCTGGGTCTGCAAAGCCTCTCGGACAGACTGGCCCCTTCCAAGGCCAACCCATGT GTCTGATGAATTGCTTGCAGAGCGAATGAGAGGAGGTTGGGTCTGCCCTCACTGGGTGTC ACACGCTGAGAGAAGTCCTATTGTAAAGAAACAAAATGGAAAAAGTCACAAAAAAGTTTG TATAAAGTCATATTTTTGTACTACATGGGGACTCTTCCTGCATGTCAGCAATAAAACTTC CTGATCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGGGGCCGGGATGCCCACTTTTCTATATTTATTGCGAAAAGAAGTCTCCTACGGGAGTG GAAATGCAGTCCGGCCCAGGGCTCCCAGTGCTGGGACTGTCCTCCCGTGAGGGCCTCACC TCAGCCCCTCGGCCGGCAGCCGGGCCACCTCGCGCGGTCCTCCGCCTCCTCGTCAAGCAA TATCCTCTGGGTCTGCAAAGCCTCTCGGACAGACTGGCCCCTTCCAAGGCCAACCCATGT GTCTGATGAATTGCTTGCAGAGCGAATGAGAGGAGGTTGGGTCTGCCCTCACTGGGTGTC ACACGCTGAGAGAAGTCCTATTGTAAAGAAACAAAATGGAAAAAGTCACAAAAAAGTTTG TATAAAGTCATATTTTTGTACTACATGGGGACTCTTCCTGCATGTCAGCAATAAAACTTC CTGATCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 3-118, + strand, RNAz p=0.965288 | |
| 160-276, - strand, RNAz p=0.766843 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 3-118, + strand, RNAz p=0.965288 | |
| 160-276, - strand, RNAz p=0.766843 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AK024504, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 3-430, gnl|bosTau2|chr3 (76595868-76596313) | |
| 3-430, gnl|Hg17|chr1 (36474781-36474323) | |
| 3-430, gnl|Mm7|chr4 (125585196-125585669) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-430, gnl|bosTau2|chr3 (76595868-76596313) | |
| 3-430, gnl|Hg17|chr1 (36474781-36474323) | |
| 3-430, gnl|Mm7|chr4 (125585196-125585669) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nms (0.213858) | |
| cli (0.152812) | |
| cly (0.120642) | |
| jej (0.0989218) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nms (0.213858) | |
| cli (0.152812) | |
| cly (0.120642) | |
| jej (0.0989218) |