Non-Coding RNA Search

Ss1.1-mAY1-MI-P-AY1-nrt-h-07-0-UI.s1.3

Sequence:


               
               CATTGGGAACCCACATCCTCGGGGGGGATTCTGGGTGCTCTTGTTGAGTCTTCAAATCGT
AGCAGTGATGAAGCCTTTCATTCATTGATCTTCGGCTTTGTTTTTTTGGACCCACTTTAT
TTTCCCTACTGTAACGAGCGCATTGTTTGGAAACGTCATGCTCTGTATTTCTAACTCTGA
GAAATGCTTTTGTATGGGTCTTAGGTTTGACGCTGCAGGAGCTGGCATAGCCAGTAAAGG
ATACCCCAGTGACAGATCGCCGCAAATGCGTCCTTTGTTACCTCAAAGGGAAAAAAAACC
CACAAAATCCAGACAACATAGAGCATTTGTATTTATAGGAAACGGAGGATTGGCTGTTTT
CCAAGAACTTCAAGTTCATTCTACGCAAGAAAAAGTTCTTAACTCTAAAAGACTTGTTCT
GCATAAAGGAGACATTCGTTAATGACGGAAGAGGTGGTTTTATTTTTACAACAAGCCTAC
TCTTATTACCAAACCTATAACCAGTTGCTGATCTCCTGTGTAAAGCATCTTTTTCTCTTA
TCTGAAACAGTGATTTATATGAACTGTTGGAATAATGGAACCTCAAACTACAGATGTGTA
TGTAAAATTGCATAAATGCACTGACTTCTTTCTCCCTGAATATATTTTTAATAAACAGCA
TTATCCTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTGGGAACCCACATCCTCGGGGGGGATTCTGGGTGCTCTTGTTGAGTCTTCAAATCGT
AGCAGTGATGAAGCCTTTCATTCATTGATCTTCGGCTTTGTTTTTTTGGACCCACTTTAT
TTTCCCTACTGTAACGAGCGCATTGTTTGGAAACGTCATGCTCTGTATTTCTAACTCTGA
GAAATGCTTTTGTATGGGTCTTAGGTTTGACGCTGCAGGAGCTGGCATAGCCAGTAAAGG
ATACCCCAGTGACAGATCGCCGCAAATGCGTCCTTTGTTACCTCAAAGGGAAAAAAAACC
CACAAAATCCAGACAACATAGAGCATTTGTATTTATAGGAAACGGAGGATTGGCTGTTTT
CCAAGAACTTCAAGTTCATTCTACGCAAGAAAAAGTTCTTAACTCTAAAAGACTTGTTCT
GCATAAAGGAGACATTCGTTAATGACGGAAGAGGTGGTTTTATTTTTACAACAAGCCTAC
TCTTATTACCAAACCTATAACCAGTTGCTGATCTCCTGTGTAAAGCATCTTTTTCTCTTA
TCTGAAACAGTGATTTATATGAACTGTTGGAATAATGGAACCTCAAACTACAGATGTGTA
TGTAAAATTGCATAAATGCACTGACTTCTTTCTCCCTGAATATATTTTTAATAAACAGCA
TTATCCTAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-668, gnl|bosTau2|chr2 (69941874-69941216)
               

               
               1-668, gnl|Hg17|chr2 (230454709-230454058)
               

               
               1-668, gnl|Mm7|chr1 (84935338-84934734)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-668, gnl|bosTau2|chr2 (69941874-69941216)
               

               
               1-668, gnl|Hg17|chr2 (230454709-230454058)
               

               
               1-668, gnl|Mm7|chr1 (84935338-84934734)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ssp (0.13552)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)

	1-668, gnl\|bosTau2\|chr2 (69941874-69941216)
	1-668, gnl\|Hg17\|chr2 (230454709-230454058)
	1-668, gnl\|Mm7\|chr1 (84935338-84934734)