Non-Coding RNA Search

Ss1.1-mAY1-MI-P-AY1-nru-d-07-0-UI.s1.3

Sequence:


               
               GTTCAGAGACTCCGAAAACAAAGAAAAAAACTGCTCAGAACAGGCCTGTCCAGAGGTTCT
GGCCCGACTCCATCGCCTCGGGGGCCGCCCAGCCAGCCGCCAGTGAGCTGACCATGTCAG
AAGGAGCTGTCGTGACGATCACCGCCCCCGTGACCATGAACGTGGACAGCCTGCAGTCCC
TGTCGTCGGACGGGGCCACGCTGGCGGTGCAGCAGGTGATGATGGCGGAGCAGAGCGAGG
ACGAGTCGGTGGACAGCACGGGGGACGGCGGGGCGGCGCTGGCACCCGGCCACCTGGGCG
GGCTGGTCCTGGAGAACAGCGACTCCCTGCAGTAGGGCCGCGCCCGCGGACTGGCCTGAC
TTTTTACAGTTTGCACAGCAAACATTTTACACAGTTTTACTCCCGTATGTTTTATATGTA
GGTTTAGAAGAGTGCACTTTTGTATTTCCCAGTCAGCTTCAAGAGCGTCTTTGCTGGTGC
AGCGACTTCTTCCAGGGTGTGTGAGTGTGTGTGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCAGAGACTCCGAAAACAAAGAAAAAAACTGCTCAGAACAGGCCTGTCCAGAGGTTCT
GGCCCGACTCCATCGCCTCGGGGGCCGCCCAGCCAGCCGCCAGTGAGCTGACCATGTCAG
AAGGAGCTGTCGTGACGATCACCGCCCCCGTGACCATGAACGTGGACAGCCTGCAGTCCC
TGTCGTCGGACGGGGCCACGCTGGCGGTGCAGCAGGTGATGATGGCGGAGCAGAGCGAGG
ACGAGTCGGTGGACAGCACGGGGGACGGCGGGGCGGCGCTGGCACCCGGCCACCTGGGCG
GGCTGGTCCTGGAGAACAGCGACTCCCTGCAGTAGGGCCGCGCCCGCGGACTGGCCTGAC
TTTTTACAGTTTGCACAGCAAACATTTTACACAGTTTTACTCCCGTATGTTTTATATGTA
GGTTTAGAAGAGTGCACTTTTGTATTTCCCAGTCAGCTTCAAGAGCGTCTTTGCTGGTGC
AGCGACTTCTTCCAGGGTGTGTGAGTGTGTGTGTGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61883181|ref|XP_612774.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61883181|ref|XP_612774.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               122-513, gnl|bosTau2|chr28 (9874088-9874477)
               

               
               122-513, gnl|Hg17|chr21 (43323067-43323462)
               

               
               122-513, gnl|Mm7|chr17 (29795674-29796074)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               122-513, gnl|bosTau2|chr28 (9874088-9874477)
               

               
               122-513, gnl|Hg17|chr21 (43323067-43323462)
               

               
               122-513, gnl|Mm7|chr17 (29795674-29796074)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hea (0.204499)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               tra (0.123092)

	122-513, gnl\|bosTau2\|chr28 (9874088-9874477)
	122-513, gnl\|Hg17\|chr21 (43323067-43323462)
	122-513, gnl\|Mm7\|chr17 (29795674-29796074)