Non-Coding RNA Search

Ss1.1-mCP0-MI-P-CP0-nvk-f-04-0-UI.s1.3

Sequence:


               
               GCGGGCAAGCGGGCGCGAGGCGGAGCGCGGGCGGCCGGGAAAGCTCGAGGGCGGACGGCG
GCGCTCGGCCCGGGCCTGCGGGAGCCGGAGACCGCGGCGGCGGCGGCGGCGGCTGCTGCC
GGAGGAGCCGAGGGTACACCGCCCTGCCCGCGCCCTGCCTCAGGCCATCGCTGCTCCCCC
GGGGCCTGGTGCGGACTCGCCCCCGTGAAGTGTCACGATGTCTGACCGGAAGGCAGTGAT
CAAGAACGCAGACATGTCTGAGGACATGCAACAAGATGCCGTTGACTGTGCCACGCAGGC
TATGGAGAAGTACAACATAGAGAAGGACATTGCTGCCTATATCAAGAAGGAATTTGACAA
GAAATATAACCCTACCTGGCATTGTATCGTGGGCCGAAATTTTGGCAGCTATGTTACACA
CGAGACAAAGCACTTCATCTATTTTTACTTGGGTCAAGTTGCAATCCTCCTCTTCAAGTC
AGGCTAGGTAGCCGCAGTGAAGGTGTCTGTGGCGGCGGCAGCGATGGCAAGCAGGCGGCG
TTGCTGGGACTGTTTTGCACTGGGGCCAGCATCAGGATGTCCTCTCCAATGGCTGTGCTA
CTGCATGGACTGTATACTCGATTTCATGTGTATGTCGCAGTAAACAAAACCAAACTTCTT
TCTGTTTAGTTGCCTGGGGAAGAAGGCTGCTTTATGTTTATTTTTCAAGACTTAAAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGGCAAGCGGGCGCGAGGCGGAGCGCGGGCGGCCGGGAAAGCTCGAGGGCGGACGGCG
GCGCTCGGCCCGGGCCTGCGGGAGCCGGAGACCGCGGCGGCGGCGGCGGCGGCTGCTGCC
GGAGGAGCCGAGGGTACACCGCCCTGCCCGCGCCCTGCCTCAGGCCATCGCTGCTCCCCC
GGGGCCTGGTGCGGACTCGCCCCCGTGAAGTGTCACGATGTCTGACCGGAAGGCAGTGAT
CAAGAACGCAGACATGTCTGAGGACATGCAACAAGATGCCGTTGACTGTGCCACGCAGGC
TATGGAGAAGTACAACATAGAGAAGGACATTGCTGCCTATATCAAGAAGGAATTTGACAA
GAAATATAACCCTACCTGGCATTGTATCGTGGGCCGAAATTTTGGCAGCTATGTTACACA
CGAGACAAAGCACTTCATCTATTTTTACTTGGGTCAAGTTGCAATCCTCCTCTTCAAGTC
AGGCTAGGTAGCCGCAGTGAAGGTGTCTGTGGCGGCGGCAGCGATGGCAAGCAGGCGGCG
TTGCTGGGACTGTTTTGCACTGGGGCCAGCATCAGGATGTCCTCTCCAATGGCTGTGCTA
CTGCATGGACTGTATACTCGATTTCATGTGTATGTCGCAGTAAACAAAACCAAACTTCTT
TCTGTTTAGTTGCCTGGGGAAGAAGGCTGCTTTATGTTTATTTTTCAAGACTTAAAAAAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|18093106|ref|NP_542428.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18093106|ref|NP_542428.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               223-486, gnl|bosTau2|chr13 (8440913-8440659)
               

               
               223-486, gnl|Hg17|chr14 (80782665-80782392)
               

               
               223-486, gnl|Mm7|chr19 (28463277-28463004)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               223-486, gnl|bosTau2|chr13 (8440913-8440659)
               

               
               223-486, gnl|Hg17|chr14 (80782665-80782392)
               

               
               223-486, gnl|Mm7|chr19 (28463277-28463004)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               isp (0.150376)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               eep (0.122564)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.150376)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               eep (0.122564)

	223-486, gnl\|bosTau2\|chr13 (8440913-8440659)
	223-486, gnl\|Hg17\|chr14 (80782665-80782392)
	223-486, gnl\|Mm7\|chr19 (28463277-28463004)