Non-Coding RNA Search

Ss1.1-mCP0-MI-P-CP0-nvu-c-11-0-UI.s1.3

Sequence:


               
               GGGATCTGAGGGCCTGGCCAGGCAGATGCTGCCGGAGGAGCAGTTGAAATGTGAGTTTCT
CCTCTTGAAAGCCTACTGTCATCCACCAAGCTCTTTCTTTGCGGAGACCCCACGCCATAT
TCAAGATTATGGTGAGCCCTTTAAAGAAGCCATGTGGCTGGACCTGGTGAAGGAAAGGCT
GACTGAGAGAGTGTACACAGTGGCCTGGTTTCTGCGAGACATGCGCCTGATCTTTCGCAA
CCATCAAATGTTTTACAAGGCGTCTGACTTTGGTCAGATAGGACTGGATCTAGAGGCAGA
ATTTGAAAAGGACCTCAAAAAAATGTTTACTGTTCACGAAGCCAGATGAGAACAGCTTCC
AGGTTCCTTCTTGGTCCTGTTCTGGAAGGACTATGGCACCCCAACTTCAAGATCCAGATG
ATGATTCCCTGGCCATCCTTCGATTGCCAATGAGTTATTGGCCCCCCAAATCCAGATCCT
TCATGGTTTTTATCACACCCCCAACTCCTTTCATGGTTTTTCTATGTCTTGCACCTCAAA
AAAATTGAATATTTTCTTAATACCATTAAATACCCCATCACAGTGCAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGATCTGAGGGCCTGGCCAGGCAGATGCTGCCGGAGGAGCAGTTGAAATGTGAGTTTCT
CCTCTTGAAAGCCTACTGTCATCCACCAAGCTCTTTCTTTGCGGAGACCCCACGCCATAT
TCAAGATTATGGTGAGCCCTTTAAAGAAGCCATGTGGCTGGACCTGGTGAAGGAAAGGCT
GACTGAGAGAGTGTACACAGTGGCCTGGTTTCTGCGAGACATGCGCCTGATCTTTCGCAA
CCATCAAATGTTTTACAAGGCGTCTGACTTTGGTCAGATAGGACTGGATCTAGAGGCAGA
ATTTGAAAAGGACCTCAAAAAAATGTTTACTGTTCACGAAGCCAGATGAGAACAGCTTCC
AGGTTCCTTCTTGGTCCTGTTCTGGAAGGACTATGGCACCCCAACTTCAAGATCCAGATG
ATGATTCCCTGGCCATCCTTCGATTGCCAATGAGTTATTGGCCCCCCAAATCCAGATCCT
TCATGGTTTTTATCACACCCCCAACTCCTTTCATGGTTTTTCTATGTCTTGCACCTCAAA
AAAATTGAATATTTTCTTAATACCATTAAATACCCCATCACAGTGCAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               258-587, gnl|bosTau2|chr2 (70863635-70863985)
               

               
               258-587, gnl|Hg17|chr2 (230859460-230859097)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               258-587, gnl|bosTau2|chr2 (70863635-70863985)
               

               
               258-587, gnl|Hg17|chr2 (230859460-230859097)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cmu (0.186393)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)
               

               
               lnt (0.142308)

	258-587, gnl\|bosTau2\|chr2 (70863635-70863985)
	258-587, gnl\|Hg17\|chr2 (230859460-230859097)