Non-Coding RNA Search

Ss1.1-mCP0-MI-P-CP0-nvz-g-02-0-UI.s1.3

Sequence:


               
               TTGCAAGGATAATGGGTTGTCACAACGTCAGAGTAATACTACGCTAGCATTAGGTTTTTA
ATAAATGCACTTCACAGAGGTCTTGGACTACTACTCTTTGATTTGGACAGTGGTTGCAAT
ACTAAACCAAATTAGAATTCGTATATTTTGGAATGTTATCAAGTAAAACTCTTCTATTTT
TGTGAGACTTGGGCTCATCTTTCATTACTTTTTTCCGTTTCACCCTGGAACAGGTTACAT
GCCAAGTTTAGAATTAGCCAATGAAATGTAAATAAACTTTGGATGGAGAATAGCAATGTA
TTTTTTTAAATATAATTTCATTATTCACAAATGACACAAATACATGTCCATAGCTTACTT
CTCCCAAATTTAGTGTACAGAAAGGTACATGGGTGATGTTACCATATCATATATGCTGCA
CAGTGACACATTTTCTTCGTGAAGTCTTGCATAGAACTATAAAGCTTTCTTTTTTCTTAG
CTATAGGTTCACAGCTCAGTGACATTACTGTTATATTATAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCAAGGATAATGGGTTGTCACAACGTCAGAGTAATACTACGCTAGCATTAGGTTTTTA
ATAAATGCACTTCACAGAGGTCTTGGACTACTACTCTTTGATTTGGACAGTGGTTGCAAT
ACTAAACCAAATTAGAATTCGTATATTTTGGAATGTTATCAAGTAAAACTCTTCTATTTT
TGTGAGACTTGGGCTCATCTTTCATTACTTTTTTCCGTTTCACCCTGGAACAGGTTACAT
GCCAAGTTTAGAATTAGCCAATGAAATGTAAATAAACTTTGGATGGAGAATAGCAATGTA
TTTTTTTAAATATAATTTCATTATTCACAAATGACACAAATACATGTCCATAGCTTACTT
CTCCCAAATTTAGTGTACAGAAAGGTACATGGGTGATGTTACCATATCATATATGCTGCA
CAGTGACACATTTTCTTCGTGAAGTCTTGCATAGAACTATAAAGCTTTCTTTTTTCTTAG
CTATAGGTTCACAGCTCAGTGACATTACTGTTATATTATAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-506, gnl|bosTau2|chr16 (34473815-34474334)
               

               
               1-506, gnl|Hg17|chr12 (91672266-91671718)
               

               
               1-506, gnl|Mm7|chr10 (95604680-95605167)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-506, gnl|bosTau2|chr16 (34473815-34474334)
               

               
               1-506, gnl|Hg17|chr12 (91672266-91671718)
               

               
               1-506, gnl|Mm7|chr10 (95604680-95605167)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	1-506, gnl\|bosTau2\|chr16 (34473815-34474334)
	1-506, gnl\|Hg17\|chr12 (91672266-91671718)
	1-506, gnl\|Mm7\|chr10 (95604680-95605167)