Non-Coding RNA Search

Ss1.1-mCP0-MI-P-CP0-nwb-g-05-0-UI.s1.3

Sequence:


               
               TATAGACGAATCGCCGGGGATTTTCACCTGGTTGGAGGGTGGTGTGTGTGTATGTGTGCG
TGTGGTGGTGTTTTGTTGGGGTTTGTTTGTTTTAAAGAAAAGGCGGAGGTCCTGGACTGA
GAGAAAAGCACATTTTAGAACAAAAAATAAAAGTAGGTTTAATGTATGTGATGATGGGAT
TGCATAGCTGGTGGATCTGGAGAGGCTGGCACGAGGGTGGTTCAGAGAAAATGTGATATA
CTGTTTCAGAACCATGGTTAAAAAAATGGATTCTCCTTTTTCCAAAATGTCCAGCAGCTG
CCTGCCGTTGCTTGAATGTTCACAAAGTACTCTCGTTTCCGTTTTCATGGTCCGTGTGCC
CATATACCATTATACCCAACTGGAGGGTTTAATTCCCAAAGTATGTTTCATGAAACCCTT
TGCTAGATGCTCTGTGGAAAAGGGGTTCTGTTGTGAAATAAATCTGGCACATCTTGCAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATAGACGAATCGCCGGGGATTTTCACCTGGTTGGAGGGTGGTGTGTGTGTATGTGTGCG
TGTGGTGGTGTTTTGTTGGGGTTTGTTTGTTTTAAAGAAAAGGCGGAGGTCCTGGACTGA
GAGAAAAGCACATTTTAGAACAAAAAATAAAAGTAGGTTTAATGTATGTGATGATGGGAT
TGCATAGCTGGTGGATCTGGAGAGGCTGGCACGAGGGTGGTTCAGAGAAAATGTGATATA
CTGTTTCAGAACCATGGTTAAAAAAATGGATTCTCCTTTTTCCAAAATGTCCAGCAGCTG
CCTGCCGTTGCTTGAATGTTCACAAAGTACTCTCGTTTCCGTTTTCATGGTCCGTGTGCC
CATATACCATTATACCCAACTGGAGGGTTTAATTCCCAAAGTATGTTTCATGAAACCCTT
TGCTAGATGCTCTGTGGAAAAGGGGTTCTGTTGTGAAATAAATCTGGCACATCTTGCAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-478, gnl|bosTau2|chr2 (73669344-73668863)
               

               
               1-478, gnl|Hg17|chr2 (232498959-232499463)
               

               
               1-478, gnl|Mm7|chr1 (86506960-86507500)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chr2 (73669344-73668863)
               

               
               1-478, gnl|Hg17|chr2 (232498959-232499463)
               

               
               1-478, gnl|Mm7|chr1 (86506960-86507500)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.29274)
               

               
               isp (0.150376)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               isp (0.150376)

	1-478, gnl\|bosTau2\|chr2 (73669344-73668863)
	1-478, gnl\|Hg17\|chr2 (232498959-232499463)
	1-478, gnl\|Mm7\|chr1 (86506960-86507500)