Ss1.1-mCP1-MI-P-CP1-nww-f-08-0-UI.s1.3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATGCTTTTTAAAAATACTGCTGGTGAGCAACGATCTTTGCTGTGCTTGTTGGTTTTTAC GATGATTGCTTATTTTTTCGTGGTAATTGGCATTTCCCCTATTTTTACGCTTTATGAACT GGATTCACCACTCTGCTGGGATGCAGTTTTAATAGGTTATGGATCAGCTTTGGGTAGTGT CTCTTTTTTCAGCAGTTTCCTAGGAATATGGCTTTTTTCTTATTGTATGGAAGATATTCA CATGGCCTACATTGGCATTTTTACCACCATGGTGGGAATGGCTATGACTGCTTTTGCCAA GACAACACTGATGATGTTTTTAGTCAGGCTGCCGCTGCTTTTCACTATCGTGCCGCTCTC TGTTCTACGGTCCATGATATCGAAAGTGGTTCGTTCTACTGAACAAGGCAGCCTGTTCGC TTGTCTTGCTTTCTTAGAAACACTTGGCGGAGTCATTGCAGTTTCTGCTTTCAACGGAAT TTATTCAGTCACCGTTGCTTGGTACAAAGGCTTTGTCTTTCTGCTCTCTGCTGTTTTATT ACTAATTCCGACCATCAGTCTATGCATTGTCAAGTGCATCAGTANGAATGCGGGAAGCTA TGTCCTTCTTATACAAGAAGAATCCAATGAAGACACCTCAGACAGATGATTAACTGTGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATGCTTTTTAAAAATACTGCTGGTGAGCAACGATCTTTGCTGTGCTTGTTGGTTTTTAC GATGATTGCTTATTTTTTCGTGGTAATTGGCATTTCCCCTATTTTTACGCTTTATGAACT GGATTCACCACTCTGCTGGGATGCAGTTTTAATAGGTTATGGATCAGCTTTGGGTAGTGT CTCTTTTTTCAGCAGTTTCCTAGGAATATGGCTTTTTTCTTATTGTATGGAAGATATTCA CATGGCCTACATTGGCATTTTTACCACCATGGTGGGAATGGCTATGACTGCTTTTGCCAA GACAACACTGATGATGTTTTTAGTCAGGCTGCCGCTGCTTTTCACTATCGTGCCGCTCTC TGTTCTACGGTCCATGATATCGAAAGTGGTTCGTTCTACTGAACAAGGCAGCCTGTTCGC TTGTCTTGCTTTCTTAGAAACACTTGGCGGAGTCATTGCAGTTTCTGCTTTCAACGGAAT TTATTCAGTCACCGTTGCTTGGTACAAAGGCTTTGTCTTTCTGCTCTCTGCTGTTTTATT ACTAATTCCGACCATCAGTCTATGCATTGTCAAGTGCATCAGTANGAATGCGGGAAGCTA TGTCCTTCTTATACAAGAAGAATCCAATGAAGACACCTCAGACAGATGATTAACTGTGAT |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 1-323, gnl|bosTau2|chr12 (16343544-16343222) | |
| 1-323, gnl|canFam2|chr25 (14027690-14027348) | |
| 1-323, gnl|danRer3|chr10 (17913910-17914251) | |
| 1-323, gnl|dasNov1|scaffold_55256 (69-415) | |
| 1-323, gnl|fr1|chrUn (133442605-133442272) | |
| 1-323, gnl|galGal2|chr1 (167801464-167801122) | |
| 1-323, gnl|hg17|chr13 (28184801-28185143) | |
| 1-323, gnl|Hg17|chr13 (28185139-28184817) | |
| 1-323, gnl|loxAfr1|scaffold_82625 (130-474) | |
| 1-323, gnl|mm7|chr5 (146780364-146780701) | |
| 1-323, gnl|Mm7|chr5 (146780697-146780375) | |
| 1-323, gnl|monDom2|scaffold_15 (38039166-38039508) | |
| 1-323, gnl|panTro1|chr14 (27369363-27369705) | |
| 1-323, gnl|rheMac2|chr17 (8348948-8349290) | |
| 1-323, gnl|rn3|chr12 (7737168-7736831) | |
| 1-323, gnl|tetNig1|chr7 (2928055-2928397) | |
| 1-323, gnl|xenTro1|scaffold_449 (955696-956034) | |
| 406-564, gnl|bosTau2|chr12 (16336649-16336491) | |
| 406-564, gnl|Hg17|chr13 (28176238-28176080) | |
| 406-564, gnl|Mm7|chr5 (146774255-146774097) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-323, gnl|bosTau2|chr12 (16343544-16343222) | |
| 1-323, gnl|canFam2|chr25 (14027690-14027348) | |
| 1-323, gnl|danRer3|chr10 (17913910-17914251) | |
| 1-323, gnl|dasNov1|scaffold_55256 (69-415) | |
| 1-323, gnl|fr1|chrUn (133442605-133442272) | |
| 1-323, gnl|galGal2|chr1 (167801464-167801122) | |
| 1-323, gnl|hg17|chr13 (28184801-28185143) | |
| 1-323, gnl|Hg17|chr13 (28185139-28184817) | |
| 1-323, gnl|loxAfr1|scaffold_82625 (130-474) | |
| 1-323, gnl|mm7|chr5 (146780364-146780701) | |
| 1-323, gnl|Mm7|chr5 (146780697-146780375) | |
| 1-323, gnl|monDom2|scaffold_15 (38039166-38039508) | |
| 1-323, gnl|panTro1|chr14 (27369363-27369705) | |
| 1-323, gnl|rheMac2|chr17 (8348948-8349290) | |
| 1-323, gnl|rn3|chr12 (7737168-7736831) | |
| 1-323, gnl|tetNig1|chr7 (2928055-2928397) | |
| 1-323, gnl|xenTro1|scaffold_449 (955696-956034) | |
| 406-564, gnl|bosTau2|chr12 (16336649-16336491) | |
| 406-564, gnl|Hg17|chr13 (28176238-28176080) | |
| 406-564, gnl|Mm7|chr5 (146774255-146774097) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.150489) | |
| cly (0.120642) |