Non-Coding RNA Search

Ss1.1-mCP1-MI-P-CP1-nza-c-07-0-UI.s1.3

Sequence:


               
               CGAGTTAGACCTCAGTGCCTGAGACTAGAGGGCACCCTGGACGAAGCTGGCAAAGGGCCA
GCATGGGGAGTCCTGGGCCTCTGGACGCCCTCTTGACTGGCCTCCTGGCCCTACTCAGAG
GTGACAGCTGGTCTAGTGAGCTGCTGACCACAGGCCAAGTTCGAGGCAAGAGCTGCCCTT
CCAGTTTTAAACATCTCGATTGGGGGGCAGATAGCCCCTGCCCCTTCTAGGGTGACTTGG
GGGGCTCAGGCTGGGGTCCCGCTGCACGGAGCCAAAACACAAAAATCATGTGGGGAAGAT
ATGCAGAGCTCATGAAGTCTGGAAGCACCCCCCTCAACCTACTCCCACCCGTCCTGTTCC
ATGTTACTCAGTTTCAAATTACTGAGGAGGAGACAGCTTTCCTTTCCCTTTTAAACTCAA
TCCGACCAATCGCTTTTAGCGCCCGCCTCTCTGACGTCAGAGTCGCTAGGCAAATTTCCC
TGTCTGGCTCTCTTAACTTCCTCCGCTGCTTGTGCGCCTGCGTGTTGCCGAGGCGGAAGC
GCAGCGTGCCTTCCCTCTTGCGCGTGCGCAGGAAATAGGTGGTCAAGTGAGAGTTTAGTG
CCGGGGATCTTCGAGTAACTCTCACAGTCGGTGGCGAGGGCGAGGACGGAAAGTGTATGA
GCTCAATAAATGCGCTGTGCACCCGCAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGTTAGACCTCAGTGCCTGAGACTAGAGGGCACCCTGGACGAAGCTGGCAAAGGGCCA
GCATGGGGAGTCCTGGGCCTCTGGACGCCCTCTTGACTGGCCTCCTGGCCCTACTCAGAG
GTGACAGCTGGTCTAGTGAGCTGCTGACCACAGGCCAAGTTCGAGGCAAGAGCTGCCCTT
CCAGTTTTAAACATCTCGATTGGGGGGCAGATAGCCCCTGCCCCTTCTAGGGTGACTTGG
GGGGCTCAGGCTGGGGTCCCGCTGCACGGAGCCAAAACACAAAAATCATGTGGGGAAGAT
ATGCAGAGCTCATGAAGTCTGGAAGCACCCCCCTCAACCTACTCCCACCCGTCCTGTTCC
ATGTTACTCAGTTTCAAATTACTGAGGAGGAGACAGCTTTCCTTTCCCTTTTAAACTCAA
TCCGACCAATCGCTTTTAGCGCCCGCCTCTCTGACGTCAGAGTCGCTAGGCAAATTTCCC
TGTCTGGCTCTCTTAACTTCCTCCGCTGCTTGTGCGCCTGCGTGTTGCCGAGGCGGAAGC
GCAGCGTGCCTTCCCTCTTGCGCGTGCGCAGGAAATAGGTGGTCAAGTGAGAGTTTAGTG
CCGGGGATCTTCGAGTAACTCTCACAGTCGGTGGCGAGGGCGAGGACGGAAAGTGTATGA
GCTCAATAAATGCGCTGTGCACCCGCAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-686, gnl|bosTau2|chr18 (39921777-39922445)
               

               
               2-686, gnl|Hg17|chr19 (40307957-40307256)
               

               
               2-686, gnl|Mm7|chr7 (28008951-28009655)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-686, gnl|bosTau2|chr18 (39921777-39922445)
               

               
               2-686, gnl|Hg17|chr19 (40307957-40307256)
               

               
               2-686, gnl|Mm7|chr7 (28008951-28009655)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sto (0.179824)
               

               
               hyp (0.142837)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               hyp (0.142837)
               

               
               ese (0.126502)

	2-686, gnl\|bosTau2\|chr18 (39921777-39922445)
	2-686, gnl\|Hg17\|chr19 (40307957-40307256)
	2-686, gnl\|Mm7\|chr7 (28008951-28009655)