Ss1.1-mCP1-MI-P-CP1-nzb-k-02-0-UI.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTTACTGGGTCGACTCCAAGCTCCACTCCATCTCCAGCATCGATGTCAACGGGGGGAA CCGGAAGACCGTCCTGGAGGACAAGACGAAGCTGGCGCACCCCTTCTCCTTGGCCATTTT TGAGGATAAAGTATTTTGGACAGATGTAATCAACGAAGCCATTTTCAGTGCCAACCGCCT CACAGGCTCGGACATACATTTGATGGCAGAAAACCTGTTGTCTCCAGAGGACATTGTCCT TTTCCACAACCTCACACAGCCGAGAGGGGTGAACTGGTGTGAAAGGACCGCCCTCCAAAA CGGTGGCTGCCAGTACCTGTGTCTGCCAGCTCCACAGATCAACCCACGCTCGCCGAAGTT CACCTGTGCCTGCCCGGATGGCATGCTGTTGGCCAAGGACATGAGGAGCTGTCTCACAGA GACTGAACCTGCAGGAACCACCCAGGGACCTTCCATGGTCAACTCGACAGCTGTGGGGCC AAAGCACACCGCCAGCTCTGAGCTCACCACAGCCGAGTCAGTGACGATGTCCCAACATGC CCTGGGCGACGTTGCTGGCCGAGGAGTCACTGAGAAGCCCCAGAGCGTGGGTGCTCTGTA CATTGTCCTCCCCATTGCACTGCTCATCCTCCTCTTCTTCGGAACCTTCCTCCTCTGGAA GAACTGGAGGCTTAAGAGCATCAACAGCATTAACTTCGACAACCCTGTGTACCAGAAGAC CACGGAAGACGACTGTTCACTGCTGTGTTTTCAGGAATCTGCCCAACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTTACTGGGTCGACTCCAAGCTCCACTCCATCTCCAGCATCGATGTCAACGGGGGGAA CCGGAAGACCGTCCTGGAGGACAAGACGAAGCTGGCGCACCCCTTCTCCTTGGCCATTTT TGAGGATAAAGTATTTTGGACAGATGTAATCAACGAAGCCATTTTCAGTGCCAACCGCCT CACAGGCTCGGACATACATTTGATGGCAGAAAACCTGTTGTCTCCAGAGGACATTGTCCT TTTCCACAACCTCACACAGCCGAGAGGGGTGAACTGGTGTGAAAGGACCGCCCTCCAAAA CGGTGGCTGCCAGTACCTGTGTCTGCCAGCTCCACAGATCAACCCACGCTCGCCGAAGTT CACCTGTGCCTGCCCGGATGGCATGCTGTTGGCCAAGGACATGAGGAGCTGTCTCACAGA GACTGAACCTGCAGGAACCACCCAGGGACCTTCCATGGTCAACTCGACAGCTGTGGGGCC AAAGCACACCGCCAGCTCTGAGCTCACCACAGCCGAGTCAGTGACGATGTCCCAACATGC CCTGGGCGACGTTGCTGGCCGAGGAGTCACTGAGAAGCCCCAGAGCGTGGGTGCTCTGTA CATTGTCCTCCCCATTGCACTGCTCATCCTCCTCTTCTTCGGAACCTTCCTCCTCTGGAA GAACTGGAGGCTTAAGAGCATCAACAGCATTAACTTCGACAACCCTGTGTACCAGAAGAC CACGGAAGACGACTGTTCACTGCTGTGTTTTCAGGAATCTGCCCAACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-125, gnl|bosTau2|chr7 (11030850-11030974) | |
| 1-125, gnl|Hg17|chr19 (11088551-11088675) | |
| 1-125, gnl|Mm7|chr9 (21621179-21621303) | |
| 265-419, gnl|bosTau2|chr7 (11031630-11031784) | |
| 265-419, gnl|canFam2|chr20 (53126259-53126114) | |
| 265-419, gnl|danRer3|chr3 (9875074-9874942) | |
| 265-419, gnl|dasNov1|scaffold_2365 (96048-96173) | |
| 265-419, gnl|echTel1|scaffold_298822 (20754-20879) | |
| 265-419, gnl|fr1|chrUn (92009086-92009220) | |
| 265-419, gnl|galGal2|chrZ_random (850722-850852) | |
| 265-419, gnl|hg17|chr19 (11092033-11092178) | |
| 265-419, gnl|Hg17|chr19 (11092044-11092198) | |
| 265-419, gnl|loxAfr1|scaffold_11930 (13923-13785) | |
| 265-419, gnl|mm7|chr9 (21622725-21622871) | |
| 265-419, gnl|Mm7|chr9 (21622734-21622891) | |
| 265-419, gnl|monDom2|scaffold_106 (3105686-3105833) | |
| 265-419, gnl|oryCun1|scaffold_144348 (785-660) | |
| 265-419, gnl|panTro1|chr20 (11490246-11490391) | |
| 265-419, gnl|rheMac2|chr19 (10938894-10939039) | |
| 265-419, gnl|rn3|chr8 (20842137-20842281) | |
| 265-419, gnl|tetNig1|chr18 (3676895-3677029) | |
| 265-419, gnl|xenTro1|scaffold_1142 (43118-42973) | |
| 608-745, gnl|bosTau2|chr7 (11036111-11036247) | |
| 608-745, gnl|Hg17|chr19 (11101179-11101315) | |
| 608-745, gnl|Mm7|chr9 (21625645-21625781) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-125, gnl|bosTau2|chr7 (11030850-11030974) | |
| 1-125, gnl|Hg17|chr19 (11088551-11088675) | |
| 1-125, gnl|Mm7|chr9 (21621179-21621303) | |
| 265-419, gnl|bosTau2|chr7 (11031630-11031784) | |
| 265-419, gnl|canFam2|chr20 (53126259-53126114) | |
| 265-419, gnl|danRer3|chr3 (9875074-9874942) | |
| 265-419, gnl|dasNov1|scaffold_2365 (96048-96173) | |
| 265-419, gnl|echTel1|scaffold_298822 (20754-20879) | |
| 265-419, gnl|fr1|chrUn (92009086-92009220) | |
| 265-419, gnl|galGal2|chrZ_random (850722-850852) | |
| 265-419, gnl|hg17|chr19 (11092033-11092178) | |
| 265-419, gnl|Hg17|chr19 (11092044-11092198) | |
| 265-419, gnl|loxAfr1|scaffold_11930 (13923-13785) | |
| 265-419, gnl|mm7|chr9 (21622725-21622871) | |
| 265-419, gnl|Mm7|chr9 (21622734-21622891) | |
| 265-419, gnl|monDom2|scaffold_106 (3105686-3105833) | |
| 265-419, gnl|oryCun1|scaffold_144348 (785-660) | |
| 265-419, gnl|panTro1|chr20 (11490246-11490391) | |
| 265-419, gnl|rheMac2|chr19 (10938894-10939039) | |
| 265-419, gnl|rn3|chr8 (20842137-20842281) | |
| 265-419, gnl|tetNig1|chr18 (3676895-3677029) | |
| 265-419, gnl|xenTro1|scaffold_1142 (43118-42973) | |
| 608-745, gnl|bosTau2|chr7 (11036111-11036247) | |
| 608-745, gnl|Hg17|chr19 (11101179-11101315) | |
| 608-745, gnl|Mm7|chr9 (21625645-21625781) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| nco (0.161734) | |
| pla (0.133672) |