Ss1.1-mCP1-MI-P-CP1-nzc-f-08-0-UI.s1.3
|
ATATAAAATTAGCATTTATTACCAAGGCTTGGATACTATATTACAAAATTTAAAATTGTG
TTTTTCAGAATTTGATTACTGTAAGATGAAGCAAATTTCAGAACTGTTATTTAAATGGAA
TGAACCATTAAATGAAGCAGCAGCCAAAGATGTCCAAGAATTTTATAAACTTGATGCAGA
CATCATCCCAGAACTTAGATTTTATCGGCAATATGCAAAGCTCAACTTTGTCCTAGAGTA
TGATTGTATCAACTTCAGCAATCTTGGTTATTTGTTTATTCAGCATGGTCTTCACAATAA
TATTCCTTGCATATCAGAGCTATTATATACTGCTTTGTCTTGGCCAGTTATTTCAGCAAG
TGTTGAAAATTCATTTTCTATACTGGCTCGTCTTAAAACATATTTATGTCATACCAGGGG
ACAAGAAAAGCTTAGTGGCTTGGCCCTAATGGCTGTTGAGCAGGAATTAGTAAGTAAACT
GATGGAGCCTGAAAGACTCAATGAAATTGTGGAAAAATTTATCCTTCAGGTGAAAGAAAT
ATAATAGTCTCTAACTTGAATTTATGTTAAAGAATTTTTCTTTTGGATATTGCAGTTTTT
ATTTCAGTTTTTCTGTCTTATAAGAAAAATCAGAACATGTAATATTCACTAGGTTCAAAA
TTCATGACACAGTGATGTACAGTGAAATGTCTCCTTCTCTTAATACCCAGTTCCCACTCC
CAGAAGTATTACCTGTTTTTTAAATATCCTTCTGGAGATACTTATTCAATGTACTCTGCA
GTGCACACTGTTTAACTTGCCTTTTTCACTTAACATATTTTTGAGATTGTGCCATATTTG
TACCTAAAGAATTTCTTGATTCTTTTTTTTACAACTGCATGAGATTTAATTCTATGAATA
TATCATAATATATTAGAGCAGCCCTGTAGTTCCCTTGTGGCAGAGCAGGTTAAGTATCCA
GCACTGTCACTATAGCTTCCTGGGTCTCTGCTGTGGCACAGGTTGGATTCTTGGCCTGGA
ATTTCTATATGCTGCAGGTGTGGCCAAAAGAACAGAAAAATATTGGAGTAGTCCCTACTG
ATAGACATTTTAATTCTTTCTAATCTTCTAGTGTTACAAATAATGCTGCATTTAATAACC
AGTACATAGGTCATATTGCACATGAGTGAATTGCTATAAGATAAAACTTTAAATTGGAAT
TATTAGGTCAGAAGATTTTTGCATTTTTTATTTGATATATTAACAAATTGCTTTCTACAA
GGATTATGCCAGTTTATAGTCCTATCAACAATGTGTAACAGTGCCTGTTTCTTTGAATCT
TGATAAAGTGTTAACAAACATTTTGATCTTTGCCAATCTGTTAGTTGAATAATGGTATGG
TATGTTAATCTCTGCAGAGATTAAATCACAGTGGAATTTTTTTATTTTCACTTAAGAATA
AGGTTGAATATCTGCTTGAGCCATTTGTATTTCCTTTTCTGTGAAATCTCACATTTAAAC
ATTAAAAATCTAAATATTGCTGTATTTTTGGTTGATACAATAGCTTGATGACATAATAGG
AATTCTTAATGTACTTTATTAAATTATGACTATTTTCAAATAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATATAAAATTAGCATTTATTACCAAGGCTTGGATACTATATTACAAAATTTAAAATTGTG
TTTTTCAGAATTTGATTACTGTAAGATGAAGCAAATTTCAGAACTGTTATTTAAATGGAA
TGAACCATTAAATGAAGCAGCAGCCAAAGATGTCCAAGAATTTTATAAACTTGATGCAGA
CATCATCCCAGAACTTAGATTTTATCGGCAATATGCAAAGCTCAACTTTGTCCTAGAGTA
TGATTGTATCAACTTCAGCAATCTTGGTTATTTGTTTATTCAGCATGGTCTTCACAATAA
TATTCCTTGCATATCAGAGCTATTATATACTGCTTTGTCTTGGCCAGTTATTTCAGCAAG
TGTTGAAAATTCATTTTCTATACTGGCTCGTCTTAAAACATATTTATGTCATACCAGGGG
ACAAGAAAAGCTTAGTGGCTTGGCCCTAATGGCTGTTGAGCAGGAATTAGTAAGTAAACT
GATGGAGCCTGAAAGACTCAATGAAATTGTGGAAAAATTTATCCTTCAGGTGAAAGAAAT
ATAATAGTCTCTAACTTGAATTTATGTTAAAGAATTTTTCTTTTGGATATTGCAGTTTTT
ATTTCAGTTTTTCTGTCTTATAAGAAAAATCAGAACATGTAATATTCACTAGGTTCAAAA
TTCATGACACAGTGATGTACAGTGAAATGTCTCCTTCTCTTAATACCCAGTTCCCACTCC
CAGAAGTATTACCTGTTTTTTAAATATCCTTCTGGAGATACTTATTCAATGTACTCTGCA
GTGCACACTGTTTAACTTGCCTTTTTCACTTAACATATTTTTGAGATTGTGCCATATTTG
TACCTAAAGAATTTCTTGATTCTTTTTTTTACAACTGCATGAGATTTAATTCTATGAATA
TATCATAATATATTAGAGCAGCCCTGTAGTTCCCTTGTGGCAGAGCAGGTTAAGTATCCA
GCACTGTCACTATAGCTTCCTGGGTCTCTGCTGTGGCACAGGTTGGATTCTTGGCCTGGA
ATTTCTATATGCTGCAGGTGTGGCCAAAAGAACAGAAAAATATTGGAGTAGTCCCTACTG
ATAGACATTTTAATTCTTTCTAATCTTCTAGTGTTACAAATAATGCTGCATTTAATAACC
AGTACATAGGTCATATTGCACATGAGTGAATTGCTATAAGATAAAACTTTAAATTGGAAT
TATTAGGTCAGAAGATTTTTGCATTTTTTATTTGATATATTAACAAATTGCTTTCTACAA
GGATTATGCCAGTTTATAGTCCTATCAACAATGTGTAACAGTGCCTGTTTCTTTGAATCT
TGATAAAGTGTTAACAAACATTTTGATCTTTGCCAATCTGTTAGTTGAATAATGGTATGG
TATGTTAATCTCTGCAGAGATTAAATCACAGTGGAATTTTTTTATTTTCACTTAAGAATA
AGGTTGAATATCTGCTTGAGCCATTTGTATTTCCTTTTCTGTGAAATCTCACATTTAAAC
ATTAAAAATCTAAATATTGCTGTATTTTTGGTTGATACAATAGCTTGATGACATAATAGG
AATTCTTAATGTACTTTATTAAATTATGACTATTTTCAAATAAAAAAA
|
|
gi|61829882|ref|XP_605770.1| |
Protein identifier
|
gi|61829882|ref|XP_605770.1| |
|
1-924, gnl|bosTau2|chr3 (77708480-77707534) |
|
1-924, gnl|Hg17|chr1 (35249410-35250299) |
| |
|
1056-1379, gnl|bosTau2|chr3 (77707552-77707247) |
|
1056-1379, gnl|Hg17|chr1 (35250281-35250594) |
| |
|
1074-1378, gnl|bosTau2|chr20 (12265355-12265660) |
|
1074-1378, gnl|Hg17|chr5 (55827551-55827197) |
|
1074-1378, gnl|Mm7|chr13 (109243599-109244030) |
| |
|
1462-1596, gnl|bosTau2|chr3 (77706506-77706377) |
|
1462-1596, gnl|canFam2|chr15 (9927987-9927785) |
|
1462-1596, gnl|hg17|chr1 (35250940-35251157) |
|
1462-1596, gnl|Hg17|chr1 (35250979-35251107) |
|
1462-1596, gnl|oryCun1|scaffold_157918 (9310-9513) |
|
1462-1596, gnl|panTro1|chr1_random (61453785-61453568) |
|
1462-1596, gnl|rheMac2|chr1 (37929184-37929394) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-924, gnl|bosTau2|chr3 (77708480-77707534) |
|
1-924, gnl|Hg17|chr1 (35249410-35250299) |
| |
|
1056-1379, gnl|bosTau2|chr3 (77707552-77707247) |
|
1056-1379, gnl|Hg17|chr1 (35250281-35250594) |
| |
|
1074-1378, gnl|bosTau2|chr20 (12265355-12265660) |
|
1074-1378, gnl|Hg17|chr5 (55827551-55827197) |
|
1074-1378, gnl|Mm7|chr13 (109243599-109244030) |
| |
|
1462-1596, gnl|bosTau2|chr3 (77706506-77706377) |
|
1462-1596, gnl|canFam2|chr15 (9927987-9927785) |
|
1462-1596, gnl|hg17|chr1 (35250940-35251157) |
|
1462-1596, gnl|Hg17|chr1 (35250979-35251107) |
|
1462-1596, gnl|oryCun1|scaffold_157918 (9310-9513) |
|
1462-1596, gnl|panTro1|chr1_random (61453785-61453568) |
|
1462-1596, gnl|rheMac2|chr1 (37929184-37929394) |
|
kid (0.259471) |
|
mas (0.210305) |
|
sag (0.182715) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
sin (0.174948) |
|
eye (0.170503) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
lin (0.145603) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
sug (0.127291) |
|
thg (0.126791) |
|
bla (0.124347) |
|
cty (0.10408) |
|
kid (0.259471) |
|
mas (0.210305) |
|
sag (0.182715) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
sin (0.174948) |
|
eye (0.170503) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
lin (0.145603) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
sug (0.127291) |
|
thg (0.126791) |
|
bla (0.124347) |
|
cty (0.10408) |
