Non-Coding RNA Search

Ss1.1-mCP1-MI-P-CP1-nzc-h-12-0-UI.s1.3

Sequence:


               
               CCCCATTAATCTTTTTGGAAGAAATTTTAGGCTAGTGTTTTCTTTATATCATTAATTCAG
AATAGGTGGGCTCTTTGTTCCTCACAATCATGTAGGTATCAAATGAACACGACGTTCACA
TTTTCGTATATGCGCATTTCCAGTTTAATTCCTAAAACACTGTAAAACGACAAAGTACAT
TTTGATTCCCTACTTCTAATTTATTGGTACCAAAGTTCTTTTTTGCTGTAGATAATTAAG
AATTGATCTTTTAAGTTAATTTACATGCTTAAAAACAGTTTTAGTAAAAAAATTTGGTAG
ACAAGAAGTTTCAACTTTAAATGGTCACCATGTTATTTAATATTCAATTCTATGAATAGA
TTGACTATCTACTTAGGCATTTTTTGCAGCCAGTTAAAAAATGATAATCTAGTCATCTAT
AGGGTCTCTCTACTTCAAAAGAATTGTTTGTGAAAGAAAATTTGTCTATGCACCTAGTAG
TAGGCTCCTGAGTTATTATTACATGATGACAAATCAGACTTTTCTAGGTTGATAATAAGA
GGTTATTTTTAAGTGGTATACTTTTAGTTGGTTTAGGATCTTAATTTTAATTAATAAAAT
ACGTAGTTTTGACTTGTTTGTCCCTTTGAATTACTGTTTTAATAATATTTTAAAAGAGCA
CAAAGAATGTTGAGGTTCAGATTCATCTCTTTTGAACAATGAACTTTTTTCTGTGTGATG
TGTGATGAGTGTTTTCCATCCTTTTTTTCATCTTGTTTATGATATTTGCAACACTGATGA
AGACATATAAAATAAAATATGTACCTAATTATTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCATTAATCTTTTTGGAAGAAATTTTAGGCTAGTGTTTTCTTTATATCATTAATTCAG
AATAGGTGGGCTCTTTGTTCCTCACAATCATGTAGGTATCAAATGAACACGACGTTCACA
TTTTCGTATATGCGCATTTCCAGTTTAATTCCTAAAACACTGTAAAACGACAAAGTACAT
TTTGATTCCCTACTTCTAATTTATTGGTACCAAAGTTCTTTTTTGCTGTAGATAATTAAG
AATTGATCTTTTAAGTTAATTTACATGCTTAAAAACAGTTTTAGTAAAAAAATTTGGTAG
ACAAGAAGTTTCAACTTTAAATGGTCACCATGTTATTTAATATTCAATTCTATGAATAGA
TTGACTATCTACTTAGGCATTTTTTGCAGCCAGTTAAAAAATGATAATCTAGTCATCTAT
AGGGTCTCTCTACTTCAAAAGAATTGTTTGTGAAAGAAAATTTGTCTATGCACCTAGTAG
TAGGCTCCTGAGTTATTATTACATGATGACAAATCAGACTTTTCTAGGTTGATAATAAGA
GGTTATTTTTAAGTGGTATACTTTTAGTTGGTTTAGGATCTTAATTTTAATTAATAAAAT
ACGTAGTTTTGACTTGTTTGTCCCTTTGAATTACTGTTTTAATAATATTTTAAAAGAGCA
CAAAGAATGTTGAGGTTCAGATTCATCTCTTTTGAACAATGAACTTTTTTCTGTGTGATG
TGTGATGAGTGTTTTCCATCCTTTTTTTCATCTTGTTTATGATATTTGCAACACTGATGA
AGACATATAAAATAAAATATGTACCTAATTATTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-816, gnl|bosTau2|chr5 (12590403-12591209)
               

               
               2-816, gnl|Hg17|chr12 (88416449-88415662)
               

               
               2-816, gnl|Mm7|chr10 (98674515-98675221)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-816, gnl|bosTau2|chr5 (12590403-12591209)
               

               
               2-816, gnl|Hg17|chr12 (88416449-88415662)
               

               
               2-816, gnl|Mm7|chr10 (98674515-98675221)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lin (0.291206)
               

               
               lyg (0.133103)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.291206)
               

               
               lyg (0.133103)

	2-816, gnl\|bosTau2\|chr5 (12590403-12591209)
	2-816, gnl\|Hg17\|chr12 (88416449-88415662)
	2-816, gnl\|Mm7\|chr10 (98674515-98675221)