Non-Coding RNA Search

Ss1.1-mE6-MI-P-E6-ahq-b-04-1-UM.s1.3

Sequence:


               
               AGATGACAGCAAAAAAGTGTTGTAATGGAAGCTAAAGCAAAGAAATGCTCTAAAGACACA
CAGAAGCACAATTTGGCATAGCTATGAAGTGTTAAGAAGCAACAGCAGCAAACAGACCAA
TTTGGGCAGGAAAGGTAGAACAAGTCATTCTTTCTGAGCAAGTGATTTGCCATGATATTG
TGCAGAGTTCTTTCTGCTACACACCAAAGAGGCCTTCAAAGGTACCCAATGTATAAAGAA
TCTCTGGTCAGTCTTTCTATCACACCTACACACACAGAGATAACCTAGTCATTATGGAAT
AATAACAACATATTAGCAGGCAACCATGACACAGTGTGCCTGTAACAAATAAACAGAGAC
TTCTTTCACAGGAAACTTGGCTTCATTTTTTTAAAAAAATCTGATTTTAAGGGCCTTAAA
ATCTATTATTTGATGACATTTGAATTTCTGAACAGAACTGAACAAATTTTTATGTTCAAA
TTTAATGAACAAAATTTTCTCTTATAATTCCAGGATAAAAGTCTGTACTTCCGAAGGACA
AGACAATGAAGGAGAAAACACAACTTTCTATAGGATTTGAAACTGATACTACCTCCAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATGACAGCAAAAAAGTGTTGTAATGGAAGCTAAAGCAAAGAAATGCTCTAAAGACACA
CAGAAGCACAATTTGGCATAGCTATGAAGTGTTAAGAAGCAACAGCAGCAAACAGACCAA
TTTGGGCAGGAAAGGTAGAACAAGTCATTCTTTCTGAGCAAGTGATTTGCCATGATATTG
TGCAGAGTTCTTTCTGCTACACACCAAAGAGGCCTTCAAAGGTACCCAATGTATAAAGAA
TCTCTGGTCAGTCTTTCTATCACACCTACACACACAGAGATAACCTAGTCATTATGGAAT
AATAACAACATATTAGCAGGCAACCATGACACAGTGTGCCTGTAACAAATAAACAGAGAC
TTCTTTCACAGGAAACTTGGCTTCATTTTTTTAAAAAAATCTGATTTTAAGGGCCTTAAA
ATCTATTATTTGATGACATTTGAATTTCTGAACAGAACTGAACAAATTTTTATGTTCAAA
TTTAATGAACAAAATTTTCTCTTATAATTCCAGGATAAAAGTCTGTACTTCCGAAGGACA
AGACAATGAAGGAGAAAACACAACTTTCTATAGGATTTGAAACTGATACTACCTCCAATG

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               2-366, gnl|bosTau2|chr10 (59819798-59820162)
               

               
               2-366, gnl|Hg17|chr14 (72842022-72842408)
               


               
               483-600, gnl|bosTau2|chr10 (59820229-59820342)
               

               
               483-600, gnl|Hg17|chr14 (72842474-72842589)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-366, gnl|bosTau2|chr10 (59819798-59820162)
               

               
               2-366, gnl|Hg17|chr14 (72842022-72842408)
               


               
               483-600, gnl|bosTau2|chr10 (59820229-59820342)
               

               
               483-600, gnl|Hg17|chr14 (72842474-72842589)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	2-366, gnl\|bosTau2\|chr10 (59819798-59820162)
	2-366, gnl\|Hg17\|chr14 (72842022-72842408)

	483-600, gnl\|bosTau2\|chr10 (59820229-59820342)
	483-600, gnl\|Hg17\|chr14 (72842474-72842589)