Non-Coding RNA Search

Ss1.1-mE7-MI-P-E7-agl-d-09-1-UM.s1.3

Sequence:


               
               GCTTTCTATCTGAAAGGTGCCTGCCGTTCTCCTTTCTCACCCACCGACAGGGACGGTCGG
GAAGGGTAGCATCGNGGGAAGGGTAGCATCNGGGGCGGTGTGCTGTGTGCTCGTAGGTCA
CGGCGTCTGTGGTCACTGCACAGAATCAGGAAAAGCCTGCTTTTTCCTTCAGAACAGCCA
GTGGGAAAAACAGTGCTACACATCTGAGTATCGTTTTAGTGTTGAAATGTAAAACCTGTG
ATAGATGTACTCGACAGATTCAAGCTCTAAGTATTTAATTTTGTATTTGAGAGACAGTAA
GTGAAACTAACGTAAGCCCTATAAACTCTGCCAAGAATAGTGATCATTTCTGTGAAGGAA
GTCTTTCGTGTTATGCTACCTACAGCATTGTGCTAAGCTCATTCACTCTTTTTGATGCAA
TAATTGGTATAAAATGTGGGTGTTCGTGCTTTGGGAAAGTGTTATGCTACAATTTAAACA
TGTAAAATGCTTGATTCTAAACGTATCAGTCATAAATTGAATAACAAGTGTGAGTTATTT
AAGTCTGAGATACGTGAATGGGTCTAATGCCATTAATATGCAGTATGTGTCTTTGCTTGT
TCCTGTTCGATGAGCTGCAAAACCCCCGCTAGCACGAGGTAAGAGATTGAAGAGAAGTTT
AAGACTCAGTATGTTAGGCTTTCATAAGATGCCCTAACATAAGAGCTCTGTTAACTAGCA
GCATAATATCTTCCGGTTTCAGGAGTCAGAATTTAGAACAGCAGGAGGAAAACTGTGATA
TGATCAGAAACAGAGCCACCTTTTCTTTAAGTTCAGGCTTATCTGAAGCTGAAAATTATT
CCAAGGAGGCAATGGATAAAAGACAGGGGATTCTAGCTCGGCTCATACTGAGAATGTAAG
AACTACAAACGAAATTTCTATTAAATTAAGTTTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTCTATCTGAAAGGTGCCTGCCGTTCTCCTTTCTCACCCACCGACAGGGACGGTCGG
GAAGGGTAGCATCGNGGGAAGGGTAGCATCNGGGGCGGTGTGCTGTGTGCTCGTAGGTCA
CGGCGTCTGTGGTCACTGCACAGAATCAGGAAAAGCCTGCTTTTTCCTTCAGAACAGCCA
GTGGGAAAAACAGTGCTACACATCTGAGTATCGTTTTAGTGTTGAAATGTAAAACCTGTG
ATAGATGTACTCGACAGATTCAAGCTCTAAGTATTTAATTTTGTATTTGAGAGACAGTAA
GTGAAACTAACGTAAGCCCTATAAACTCTGCCAAGAATAGTGATCATTTCTGTGAAGGAA
GTCTTTCGTGTTATGCTACCTACAGCATTGTGCTAAGCTCATTCACTCTTTTTGATGCAA
TAATTGGTATAAAATGTGGGTGTTCGTGCTTTGGGAAAGTGTTATGCTACAATTTAAACA
TGTAAAATGCTTGATTCTAAACGTATCAGTCATAAATTGAATAACAAGTGTGAGTTATTT
AAGTCTGAGATACGTGAATGGGTCTAATGCCATTAATATGCAGTATGTGTCTTTGCTTGT
TCCTGTTCGATGAGCTGCAAAACCCCCGCTAGCACGAGGTAAGAGATTGAAGAGAAGTTT
AAGACTCAGTATGTTAGGCTTTCATAAGATGCCCTAACATAAGAGCTCTGTTAACTAGCA
GCATAATATCTTCCGGTTTCAGGAGTCAGAATTTAGAACAGCAGGAGGAAAACTGTGATA
TGATCAGAAACAGAGCCACCTTTTCTTTAAGTTCAGGCTTATCTGAAGCTGAAAATTATT
CCAAGGAGGCAATGGATAAAAGACAGGGGATTCTAGCTCGGCTCATACTGAGAATGTAAG
AACTACAAACGAAATTTCTATTAAATTAAGTTTTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               77-871, gnl|bosTau2|chr3 (31756168-31755377)
               

               
               77-871, gnl|Hg17|chr1 (108889995-108890749)
               

               
               77-871, gnl|Mm7|chr3 (108793391-108792638)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               77-871, gnl|bosTau2|chr3 (31756168-31755377)
               

               
               77-871, gnl|Hg17|chr1 (108889995-108890749)
               

               
               77-871, gnl|Mm7|chr3 (108793391-108792638)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               isp (0.150376)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.150376)

	77-871, gnl\|bosTau2\|chr3 (31756168-31755377)
	77-871, gnl\|Hg17\|chr1 (108889995-108890749)
	77-871, gnl\|Mm7\|chr3 (108793391-108792638)