Ss1.1-mE7-MI-P-E7-agy-g-07-1-UM.s1.3
|
CTGCCATTCCCCTCCATGGACAGATGAGTCAGAGCAAGCGCCTGGGATCCCTTAATAAGT
TTAAGGCAAAGGCTCGTTCCATTCTTCTGGCAACTGACGTTGCAAGCCGGGGTTTGGACA
TACCTCACGTGGATGTGGTTGTCAACTTTGACATTCCTACCCATTCCAAGGATTACATCC
ATCGAGTAGGTCGAACTGCTCGAGCTGGGCGCTCTGGAAAGGCCATTACCTTTGTCACAC
AATACGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGGGAAGAAACTGCCTGTCT
TTCCAACCCAGGATGATGAGGTTATGATGTTGACAGAACGTGTGACTGAAGCCCAAAGAT
TTGCCCGAATGGAATTAAGGGAGCATGGAGAAAAGAAGAAGCGCTCACGGGAAGACACTG
GGGACAATGATGACACGGAGGGTGCAATTGGTGTCAGGAACAAGGTGGCTGGAGGAAAAA
TGAAGAAACGGAAAGGCCGTTAATCTCTTTTATAAAGACTCGATTCCTGCTTTCTTTTCT
GTAAAGAGCATTGAAGGAGAAAATGGACCTCTTCTAGCAGAGTTCCTCAGGCCAAAGTCT
GTCAGACTTGTGTCCAGAATCTGCTCAGCTCTTTTGGGGCTCATCCCCGTTTTCGTGTGT
CAGAGCGAAGTTGTTGTTGTTGCTGCTGCAGAATGTTTTCCCAATGCTGATGTCAAGGCT
GGGACTGGTCTTCAGCTTTGGTTCCTTGCTCCCCACACCAGTAGGATGTGCCTTCCTCTT
CCTTCACACAGACCTGTGCTATTTTCAGCCGCAAGTCAAGGATGGGTTGAGGAAGCACCT
GACCTGTAATTGTCAAGAAAGGAGCCTATACATTTATAAAATAGTGATACTTCAGCAACC
TCAGCTTGTGCTTCATGAGACTGAATGGGAAATAATAAATTTAAATATTATTTTTAAAAG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGCCATTCCCCTCCATGGACAGATGAGTCAGAGCAAGCGCCTGGGATCCCTTAATAAGT
TTAAGGCAAAGGCTCGTTCCATTCTTCTGGCAACTGACGTTGCAAGCCGGGGTTTGGACA
TACCTCACGTGGATGTGGTTGTCAACTTTGACATTCCTACCCATTCCAAGGATTACATCC
ATCGAGTAGGTCGAACTGCTCGAGCTGGGCGCTCTGGAAAGGCCATTACCTTTGTCACAC
AATACGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGGGAAGAAACTGCCTGTCT
TTCCAACCCAGGATGATGAGGTTATGATGTTGACAGAACGTGTGACTGAAGCCCAAAGAT
TTGCCCGAATGGAATTAAGGGAGCATGGAGAAAAGAAGAAGCGCTCACGGGAAGACACTG
GGGACAATGATGACACGGAGGGTGCAATTGGTGTCAGGAACAAGGTGGCTGGAGGAAAAA
TGAAGAAACGGAAAGGCCGTTAATCTCTTTTATAAAGACTCGATTCCTGCTTTCTTTTCT
GTAAAGAGCATTGAAGGAGAAAATGGACCTCTTCTAGCAGAGTTCCTCAGGCCAAAGTCT
GTCAGACTTGTGTCCAGAATCTGCTCAGCTCTTTTGGGGCTCATCCCCGTTTTCGTGTGT
CAGAGCGAAGTTGTTGTTGTTGCTGCTGCAGAATGTTTTCCCAATGCTGATGTCAAGGCT
GGGACTGGTCTTCAGCTTTGGTTCCTTGCTCCCCACACCAGTAGGATGTGCCTTCCTCTT
CCTTCACACAGACCTGTGCTATTTTCAGCCGCAAGTCAAGGATGGGTTGAGGAAGCACCT
GACCTGTAATTGTCAAGAAAGGAGCCTATACATTTATAAAATAGTGATACTTCAGCAACC
TCAGCTTGTGCTTCATGAGACTGAATGGGAAATAATAAATTTAAATATTATTTTTAAAAG |
|
gi|33338224|gb|AAQ13709.1| |
Protein identifier
|
gi|33338224|gb|AAQ13709.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
29-171, gnl|bosTau2|chr5 (57734136-57733994) |
|
29-171, gnl|canFam2|chr27 (36531835-36531649) |
|
29-171, gnl|danRer3|chr4 (22483253-22483101) |
|
29-171, gnl|dasNov1|scaffold_59404 (3191-3378) |
|
29-171, gnl|echTel1|scaffold_48160 (1068-1254) |
|
29-171, gnl|fr1|chrUn (119898253-119898422) |
|
29-171, gnl|galGal2|chr1 (44955759-44955922) |
|
29-171, gnl|hg17|chr12 (12868724-12868911) |
|
29-171, gnl|Hg17|chr12 (12868737-12868879) |
|
29-171, gnl|loxAfr1|scaffold_1300 (140467-140280) |
|
29-171, gnl|mm7|chr6 (135033285-135033466) |
|
29-171, gnl|Mm7|chr6 (135033292-135033434) |
|
29-171, gnl|monDom2|scaffold_31 (18489503-18489320) |
|
29-171, gnl|oryCun1|scaffold_214928 (57397-57210) |
|
29-171, gnl|panTro1|chrUn_random (39123600-39123787) |
|
29-171, gnl|rheMac2|chr11 (13187197-13187384) |
|
29-171, gnl|rn3|chr4 (172180593-172180779) |
|
29-171, gnl|tetNig1|chrUn_random (54080985-54081139) |
|
29-171, gnl|xenTro1|scaffold_156 (945177-945004) |
| |
|
371-959, gnl|bosTau2|chr5 (57729492-57728921) |
|
371-959, gnl|Hg17|chr12 (12873623-12874180) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
29-171, gnl|bosTau2|chr5 (57734136-57733994) |
|
29-171, gnl|canFam2|chr27 (36531835-36531649) |
|
29-171, gnl|danRer3|chr4 (22483253-22483101) |
|
29-171, gnl|dasNov1|scaffold_59404 (3191-3378) |
|
29-171, gnl|echTel1|scaffold_48160 (1068-1254) |
|
29-171, gnl|fr1|chrUn (119898253-119898422) |
|
29-171, gnl|galGal2|chr1 (44955759-44955922) |
|
29-171, gnl|hg17|chr12 (12868724-12868911) |
|
29-171, gnl|Hg17|chr12 (12868737-12868879) |
|
29-171, gnl|loxAfr1|scaffold_1300 (140467-140280) |
|
29-171, gnl|mm7|chr6 (135033285-135033466) |
|
29-171, gnl|Mm7|chr6 (135033292-135033434) |
|
29-171, gnl|monDom2|scaffold_31 (18489503-18489320) |
|
29-171, gnl|oryCun1|scaffold_214928 (57397-57210) |
|
29-171, gnl|panTro1|chrUn_random (39123600-39123787) |
|
29-171, gnl|rheMac2|chr11 (13187197-13187384) |
|
29-171, gnl|rn3|chr4 (172180593-172180779) |
|
29-171, gnl|tetNig1|chrUn_random (54080985-54081139) |
|
29-171, gnl|xenTro1|scaffold_156 (945177-945004) |
| |
|
371-959, gnl|bosTau2|chr5 (57729492-57728921) |
|
371-959, gnl|Hg17|chr12 (12873623-12874180) |
|
mas (0.210305) |
|
ill (0.175593) |
|
lnt (0.142308) |
|
ste (0.135208) |
|
ute (0.132784) |
|
bla (0.124347) |
|
clu (0.119646) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
mas (0.210305) |
|
ill (0.175593) |
|
lnt (0.142308) |
|
ste (0.135208) |
|
ute (0.132784) |
|
bla (0.124347) |
|
clu (0.119646) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
