Non-Coding RNA Search

Ss1.1-mH0-MI-P-HO-aga-a-08-1-UM.s1.3

Sequence:


               
               GAGTGGACCACCCCAGACAGGTTCAATCCAGAGCATTTTCTGGAGAATGGGCAGTTTAAG
AAACGGGAAGCTTTTCTGCCTTTCTCAATAGGAAAGCGGGCGTGCCTTGGAGAACAGCTG
GCCAGGACTGAGCTGTTCGTTTTCTTTACTTCCCTTTTACAAAAATTCTCCTTCAGGCCT
CCAGACAATGAGAAGCTGAGCCTCAAGTTCAGAATGGGCCTGACCCTCTCCCCAGTCACC
TACCGCATCTGTGCTGTTCCCAGGGCATGAGGTTGTGGGAGGGGGAGGGGAAGGAAAGCA
GGAAGAATGGGCACCTCCCCCAAGGCAGGGGCTCCTGCTCAGAAGTGAGGGGACAGCATC
AAGTGCCTCTGAGCACAGGTCCTAGGAACTGCACTCAGAGGAACCTGGGTCCAAACCCCA
GCTTTGCCACCTCCAGTGTGGCCCTGGGCAAATCAGTTAAGATGTATGTGAGTCATTTGC
CTTTTCATCTGGGAGATTTGAAGAGGATCATGATTGCTTCTGTAAAGGAAGAACTGCTTT
AAAAATCAGAGGAAATAATGGACTTGAAGTGGTTTGGAAACCATAAAGCTCATTATAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTGGACCACCCCAGACAGGTTCAATCCAGAGCATTTTCTGGAGAATGGGCAGTTTAAG
AAACGGGAAGCTTTTCTGCCTTTCTCAATAGGAAAGCGGGCGTGCCTTGGAGAACAGCTG
GCCAGGACTGAGCTGTTCGTTTTCTTTACTTCCCTTTTACAAAAATTCTCCTTCAGGCCT
CCAGACAATGAGAAGCTGAGCCTCAAGTTCAGAATGGGCCTGACCCTCTCCCCAGTCACC
TACCGCATCTGTGCTGTTCCCAGGGCATGAGGTTGTGGGAGGGGGAGGGGAAGGAAAGCA
GGAAGAATGGGCACCTCCCCCAAGGCAGGGGCTCCTGCTCAGAAGTGAGGGGACAGCATC
AAGTGCCTCTGAGCACAGGTCCTAGGAACTGCACTCAGAGGAACCTGGGTCCAAACCCCA
GCTTTGCCACCTCCAGTGTGGCCCTGGGCAAATCAGTTAAGATGTATGTGAGTCATTTGC
CTTTTCATCTGGGAGATTTGAAGAGGATCATGATTGCTTCTGTAAAGGAAGAACTGCTTT
AAAAATCAGAGGAAATAATGGACTTGAAGTGGTTTGGAAACCATAAAGCTCATTATAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61860922|ref|XP_583063.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61860922|ref|XP_583063.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               89-599, gnl|bosTau2|chr3 (57451113-57451624)
               

               
               89-599, gnl|Hg17|chr1 (60071525-60071014)
               

               
               89-599, gnl|Mm7|chr4 (95961512-95961044)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-599, gnl|bosTau2|chr3 (57451113-57451624)
               

               
               89-599, gnl|Hg17|chr1 (60071525-60071014)
               

               
               89-599, gnl|Mm7|chr4 (95961512-95961044)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pgl (0.118483)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)
               

               
               spc (0.113366)

	89-599, gnl\|bosTau2\|chr3 (57451113-57451624)
	89-599, gnl\|Hg17\|chr1 (60071525-60071014)
	89-599, gnl\|Mm7\|chr4 (95961512-95961044)