Non-Coding RNA Search

Ss1.1-mH1-MI-P-H1-adu-b-09-1-UM.s1.3

Sequence:


               
               TCGTCCTTACAAGAAAGTGATTTGTAGCCTGTAAATATTAAGACGATTGCTCTTCTCCTG
AAAGTGTGTTTATACACCTGTACATACAAACACCCTACCAGTCTGATTTTTCTTCAGGAT
TATGAGTAGGTTCTGAATTTTCTTTCTTAAAAGTTTTCAAGCATAATGGTACCCACATTT
TAGACTTTGACTTTAAGCATTTCTCAGTGAAATTTAGTTCACAAAGAATCTTAAATTATG
TCTTTGAGTCTTTAGATACATTTCCTGAATATTTTAATTTAAAATTGTTAGAATTGGATC
ACCTAATATTCTTTTCAAGACTCCTGGTGTATTAGAACTTCATATTGTTGTCACTCCTTG
AAAAAAATAAAACTCTCAGGAATTAAATAGATGTATTTCTTAAATTAAATGATAAAGAAT
TTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGTCCTTACAAGAAAGTGATTTGTAGCCTGTAAATATTAAGACGATTGCTCTTCTCCTG
AAAGTGTGTTTATACACCTGTACATACAAACACCCTACCAGTCTGATTTTTCTTCAGGAT
TATGAGTAGGTTCTGAATTTTCTTTCTTAAAAGTTTTCAAGCATAATGGTACCCACATTT
TAGACTTTGACTTTAAGCATTTCTCAGTGAAATTTAGTTCACAAAGAATCTTAAATTATG
TCTTTGAGTCTTTAGATACATTTCCTGAATATTTTAATTTAAAATTGTTAGAATTGGATC
ACCTAATATTCTTTTCAAGACTCCTGGTGTATTAGAACTTCATATTGTTGTCACTCCTTG
AAAAAAATAAAACTCTCAGGAATTAAATAGATGTATTTCTTAAATTAAATGATAAAGAAT
TTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTCTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-404, gnl|bosTau2|chr7 (32308660-32308268)
               

               
               1-404, gnl|Hg17|chr5 (134193004-134194049)
               

               
               1-404, gnl|Mm7|chr13 (54767472-54768397)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-404, gnl|bosTau2|chr7 (32308660-32308268)
               

               
               1-404, gnl|Hg17|chr5 (134193004-134194049)
               

               
               1-404, gnl|Mm7|chr13 (54767472-54768397)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-404, gnl\|bosTau2\|chr7 (32308660-32308268)
	1-404, gnl\|Hg17\|chr5 (134193004-134194049)
	1-404, gnl\|Mm7\|chr13 (54767472-54768397)