Non-Coding RNA Search

Ss1.1-mH3-MI-P-H3-aat-g-02-1-UM.s1.3

Sequence:


               
               AAAAAATGAAGCAACTTGTCTAAGAGGGGGCAGATTTAAAGGTTGACTTGACAGCCCATA
CTCTCCTGCCTATCCCTACTGTGTTCCCCAAATACCGAAAGTTAACGAGTTCACAGGAGT
ATGGGAATAAGCATTTCTGTGGGTGCACCGGGAATGGTAGAAATACCTTATAATAAGAAG
ACTGATAATTCTCTTGGCAGCTAGTTTAAGAGCTGAACAGTGTGTCTAGAGTCCCAAGGA
ACTTGGAATTGTATTCCTGGCGCACACTATGTACCTGGATTCTTTGGAGTTTCATGTATA
AGATTCTCATCCTTCACATGGCTGGTGGCTCTCCTATGAGTGGGTAGGATTTCTTTACAA
AAGGCAAAATGTCATATCTGAAAGCTGAGATGCCTGTGTCCTTTTCCTGTAGAGCACCCA
GACTGCTGGCCATTCTTTGTCCAAAATAGTAGTTTTAGGTCATCTGAATGTAAGAAATAC
ATTTTTTTCCCTCTTTCATCATCAATATGTTTTATTTATAAACACTTACCTTAATATGTT
GCTGTATTCTGAAAGGAGCATATATTGCTTAATTAGATATACTGAGAAAAGCAGTATTTT
AGAATTTGGGGAAAAGCTGATCTGGGATTTGTTTAAAGTTTTCTTTTAAATTGTATTGGA
ATTTAGCTGATTTACAATATTGTATTGGTTTCAGGTGTATAGCAAAATGAATCAGTTGTG
CATATCTATTCCTTTTCCCAGAGAGGTGATTACAGAACCTATTGAGTAGACCTCCCTGTG
CTATATAGTGGGTCCTTGTTACTATCTATTTTATATACAGTAGTGTGTATGTGTTAATCC
CATCCTTCCAATTTACCCCTCCCCCTCTACAGTTTCCCCTTTGGTAACCATGAGTTTCAT
TTTGAAATCTGTAAGATTTTTTTTAATAAATAAGTTCATTTTTATTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAATGAAGCAACTTGTCTAAGAGGGGGCAGATTTAAAGGTTGACTTGACAGCCCATA
CTCTCCTGCCTATCCCTACTGTGTTCCCCAAATACCGAAAGTTAACGAGTTCACAGGAGT
ATGGGAATAAGCATTTCTGTGGGTGCACCGGGAATGGTAGAAATACCTTATAATAAGAAG
ACTGATAATTCTCTTGGCAGCTAGTTTAAGAGCTGAACAGTGTGTCTAGAGTCCCAAGGA
ACTTGGAATTGTATTCCTGGCGCACACTATGTACCTGGATTCTTTGGAGTTTCATGTATA
AGATTCTCATCCTTCACATGGCTGGTGGCTCTCCTATGAGTGGGTAGGATTTCTTTACAA
AAGGCAAAATGTCATATCTGAAAGCTGAGATGCCTGTGTCCTTTTCCTGTAGAGCACCCA
GACTGCTGGCCATTCTTTGTCCAAAATAGTAGTTTTAGGTCATCTGAATGTAAGAAATAC
ATTTTTTTCCCTCTTTCATCATCAATATGTTTTATTTATAAACACTTACCTTAATATGTT
GCTGTATTCTGAAAGGAGCATATATTGCTTAATTAGATATACTGAGAAAAGCAGTATTTT
AGAATTTGGGGAAAAGCTGATCTGGGATTTGTTTAAAGTTTTCTTTTAAATTGTATTGGA
ATTTAGCTGATTTACAATATTGTATTGGTTTCAGGTGTATAGCAAAATGAATCAGTTGTG
CATATCTATTCCTTTTCCCAGAGAGGTGATTACAGAACCTATTGAGTAGACCTCCCTGTG
CTATATAGTGGGTCCTTGTTACTATCTATTTTATATACAGTAGTGTGTATGTGTTAATCC
CATCCTTCCAATTTACCCCTCCCCCTCTACAGTTTCCCCTTTGGTAACCATGAGTTTCAT
TTTGAAATCTGTAAGATTTTTTTTAATAAATAAGTTCATTTTTATTAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               627-948, gnl|bosTau2|chr10 (4109777-4109454)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               627-948, gnl|bosTau2|chr10 (4109777-4109454)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fco (0.157208)
               

               
               ret (0.128733)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               ret (0.128733)
               

               
               spc (0.113366)