Non-Coding RNA Search

Ss1.1-mH3-MI-P-H3-afa-h-09-1-UM.s1.3

Sequence:


               
               GACTTCCGAGTGTGTGGACGTGATACTTGCATCTGGCCTTCCCTGGACTTGGAACAATTC
AACTGGTTCCTCTAGCGCTGGGATGCCAGTCCTGGATCTTTGGAGAGCTGTAGCCACCAA
GGAAGTCCTTCCAGTGCTTTCTACAGCCATGGCCTCGCGGGAGAGGGAAAGGCTGTCTTG
GGAAGTCAGCTGAAGATGCCCCTTCCTTGTTAATGCCTGAGCCCTTACAAGAAGCCAACC
ACAGAGTTGAGAGCTTCACAGGCACTCTAAGTCTGTGCAGATTCTCAAGGTAGCTATTTA
TCATCCATGCCTTGAGTGACCCTACGTCTAATTAAACTAGACCAACCTGAGTCCGGTGCA
AAGACAAATGGCCCCCTCGAGTGCTCATAGGAAAACCCAGGGCTTTTCTATGGCTCAAGC
TCCTCCTCCGTGGCCTCCCAGGCTGCTCGGGTGGTCTTTGTGGGAGCTCTTCTGAGCAGT
CCTCACTGACAGGTCCTATCCAGGCTGGCCGGTGCGCCATTCAAACAAACAAGAGCTGTC
AAACCAGACAACATTTCAAACGACAATTTAATTAAATACAAACAAGGAAAAAAGGCACCA
CGGCCCATTCAAGTATTTTGCATAGATATACAAATATTGTAAACAATTAATAGGTGGACG
AGAGAAAAGAGGTCTGTTTTCCGTGAACAATCTCCCANAATAAAAATTCACATTGCCATG
GAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACTTCCGAGTGTGTGGACGTGATACTTGCATCTGGCCTTCCCTGGACTTGGAACAATTC
AACTGGTTCCTCTAGCGCTGGGATGCCAGTCCTGGATCTTTGGAGAGCTGTAGCCACCAA
GGAAGTCCTTCCAGTGCTTTCTACAGCCATGGCCTCGCGGGAGAGGGAAAGGCTGTCTTG
GGAAGTCAGCTGAAGATGCCCCTTCCTTGTTAATGCCTGAGCCCTTACAAGAAGCCAACC
ACAGAGTTGAGAGCTTCACAGGCACTCTAAGTCTGTGCAGATTCTCAAGGTAGCTATTTA
TCATCCATGCCTTGAGTGACCCTACGTCTAATTAAACTAGACCAACCTGAGTCCGGTGCA
AAGACAAATGGCCCCCTCGAGTGCTCATAGGAAAACCCAGGGCTTTTCTATGGCTCAAGC
TCCTCCTCCGTGGCCTCCCAGGCTGCTCGGGTGGTCTTTGTGGGAGCTCTTCTGAGCAGT
CCTCACTGACAGGTCCTATCCAGGCTGGCCGGTGCGCCATTCAAACAAACAAGAGCTGTC
AAACCAGACAACATTTCAAACGACAATTTAATTAAATACAAACAAGGAAAAAAGGCACCA
CGGCCCATTCAAGTATTTTGCATAGATATACAAATATTGTAAACAATTAATAGGTGGACG
AGAGAAAAGAGGTCTGTTTTCCGTGAACAATCTCCCANAATAAAAATTCACATTGCCATG
GAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               392-722, gnl|bosTau2|chr7 (47980915-47980578)
               

               
               392-722, gnl|Hg17|chr5 (156836707-156837078)
               

               
               392-722, gnl|Mm7|chr11 (46104254-46103892)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               392-722, gnl|bosTau2|chr7 (47980915-47980578)
               

               
               392-722, gnl|Hg17|chr5 (156836707-156837078)
               

               
               392-722, gnl|Mm7|chr11 (46104254-46103892)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	392-722, gnl\|bosTau2\|chr7 (47980915-47980578)
	392-722, gnl\|Hg17\|chr5 (156836707-156837078)
	392-722, gnl\|Mm7\|chr11 (46104254-46103892)