Non-Coding RNA Search

Ss1.1-mO1-MI-P-O1-abx-f-12-1-UM.s1.3

Sequence:


               
               TATCGTTATTTGAGATTGAGTTAAATCGTGGCAATCAAATGACTTTTGAAGCTCATTCAT
CACGAGAGACAGCTTAGAAGAATGTTCTCTTGGGGCTTAAAGATGCAATATCGACTTTTC
TTTTGTTTGTCAAATTCAATGTGATACGAATATTTACTGGTGAAAGGTACCACAAAAGTG
CTTTATGCTTCCTTGAGGAAGGGACTCTGTAACATAAACTTGAGTTTTGTAATTTATACA
AGGACTTAAATATATAGACAATAATTTTCTTCATCTTTAGAATTTTTAAAGTAAATGAAC
ACTTATGATTGTATGTTTATTTTTTAAAAAAAGTTTTAAAAATTGAGGAGTTTTGTTCCA
CAAGCAACCGGTACTGGCTACCCTGGTCTTATGACAATTATGTGCTCCTCACAACTGTCT
GCTATAAATGCGAATGAACTTTATTTTCTCAAGGAAATATGATTTAATTAAATATTCATG
TACATTTTAGAAGCTTTATGAAACAATGTCCTTCATTTGCTGGCAAGAAGATAAACTATG
ACAGAACCTGGTTATTTATAATAAAACACAGGTATAACAGTATTCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCGTTATTTGAGATTGAGTTAAATCGTGGCAATCAAATGACTTTTGAAGCTCATTCAT
CACGAGAGACAGCTTAGAAGAATGTTCTCTTGGGGCTTAAAGATGCAATATCGACTTTTC
TTTTGTTTGTCAAATTCAATGTGATACGAATATTTACTGGTGAAAGGTACCACAAAAGTG
CTTTATGCTTCCTTGAGGAAGGGACTCTGTAACATAAACTTGAGTTTTGTAATTTATACA
AGGACTTAAATATATAGACAATAATTTTCTTCATCTTTAGAATTTTTAAAGTAAATGAAC
ACTTATGATTGTATGTTTATTTTTTAAAAAAAGTTTTAAAAATTGAGGAGTTTTGTTCCA
CAAGCAACCGGTACTGGCTACCCTGGTCTTATGACAATTATGTGCTCCTCACAACTGTCT
GCTATAAATGCGAATGAACTTTATTTTCTCAAGGAAATATGATTTAATTAAATATTCATG
TACATTTTAGAAGCTTTATGAAACAATGTCCTTCATTTGCTGGCAAGAAGATAAACTATG
ACAGAACCTGGTTATTTATAATAAAACACAGGTATAACAGTATTCTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr7 (19833183-19833771)
               

               
               1-588, gnl|Hg17|chr5 (129549624-129550212)
               

               
               1-588, gnl|Mm7|chr18 (59800056-59800645)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr7 (19833183-19833771)
               

               
               1-588, gnl|Hg17|chr5 (129549624-129550212)
               

               
               1-588, gnl|Mm7|chr18 (59800056-59800645)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               mgp (0.230681)
               

               
               gul (0.177588)
               

               
               nca (0.136874)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               gul (0.177588)
               

               
               nca (0.136874)
               

               
               spc (0.113366)

	1-588, gnl\|bosTau2\|chr7 (19833183-19833771)
	1-588, gnl\|Hg17\|chr5 (129549624-129550212)
	1-588, gnl\|Mm7\|chr18 (59800056-59800645)