Non-Coding RNA Search

Ss1.1-mO1-MI-P-O1-adp-f-10-1-UM.s1.3

Sequence:


               
               TGCAGCTCTGATTCGACCCCCTAGTCTGGGAACTTCCTATGCCACAGCTGTGGCCCTAAA
AAGGAAGGGAAAAAAAAAAAAAGACTATCACTGTCATATATTTGATCATTGGATTAATTA
GCCCATCAATTAGTATTGAGAATTCTATTCATGGTGCTGAATAGTTTGAGGGGTATAATA
TTGTGTAAGTCATAGCTCTAAGTGATTGTATAGTGTACATAAATTATAATCTCTAAATAG
TCAGCTTTATCTAATTCGAGGGCATTAAAATCAATTACTGCCTGGAACTTTGAAGAGAGA
AAAATTCAGGGACAAGTTGAAAAGCACTGGAATTGTTCATGTCCATACCAGATTGGTAAG
TTACAAAATTTAGAAGCTGGTGTCTAGAATTAACTGTTTAGAATTCAAAAGGGGAGGTAT
GTTTTAACTTTGTGATATATTAGCAAGAATTGGTCTACTGTAATGTTTGGGGAGGAGAGG
GAAGAAGTTTTTCACTCATGCACTTGTATATGAAGACAGTTTGTATGACACAATACAAAA
CTTTTAAACAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCAGCTCTGATTCGACCCCCTAGTCTGGGAACTTCCTATGCCACAGCTGTGGCCCTAAA
AAGGAAGGGAAAAAAAAAAAAAGACTATCACTGTCATATATTTGATCATTGGATTAATTA
GCCCATCAATTAGTATTGAGAATTCTATTCATGGTGCTGAATAGTTTGAGGGGTATAATA
TTGTGTAAGTCATAGCTCTAAGTGATTGTATAGTGTACATAAATTATAATCTCTAAATAG
TCAGCTTTATCTAATTCGAGGGCATTAAAATCAATTACTGCCTGGAACTTTGAAGAGAGA
AAAATTCAGGGACAAGTTGAAAAGCACTGGAATTGTTCATGTCCATACCAGATTGGTAAG
TTACAAAATTTAGAAGCTGGTGTCTAGAATTAACTGTTTAGAATTCAAAAGGGGAGGTAT
GTTTTAACTTTGTGATATATTAGCAAGAATTGGTCTACTGTAATGTTTGGGGAGGAGAGG
GAAGAAGTTTTTCACTCATGCACTTGTATATGAAGACAGTTTGTATGACACAATACAAAA
CTTTTAAACAAC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               81-552, gnl|bosTau2|chr3 (10708224-10708704)
               

               
               81-552, gnl|Hg17|chr1 (152681134-152680671)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               81-552, gnl|bosTau2|chr3 (10708224-10708704)
               

               
               81-552, gnl|Hg17|chr1 (152681134-152680671)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               fhi (0.169578)
               

               
               mga (0.160205)
               

               
               lnt (0.142308)
               

               
               nmm (0.132802)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               ret (0.128733)
               

               
               ebs (0.118301)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               mga (0.160205)
               

               
               lnt (0.142308)
               

               
               nmm (0.132802)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               ret (0.128733)
               

               
               ebs (0.118301)

	81-552, gnl\|bosTau2\|chr3 (10708224-10708704)
	81-552, gnl\|Hg17\|chr1 (152681134-152680671)

	fhi (0.169578)
	mga (0.160205)
	lnt (0.142308)
	nmm (0.132802)
	kid (0.129735)
	ova (0.129132)
	ret (0.128733)
	ebs (0.118301)