Ss1.1-nep34c_d2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACTGGCAGCAAATGGGGACACAGCAGCTGGCCTGGGAGCAGCAGGGTTGGCAGCAGCTG GACTGGCAACGACTAGACTGGCAGCAACCACAAGAGCCACAGCTGGAGCAGGCACAGGCT GGCACACAGCAGCACACGGGCCTGCAGCAGCTGGACTGGGAGCAGCCACAGGAGCCACAG CCCCCCTTGGAGCCCCCACAGGAGCCACTGCCCCCTTTGCCACAGCCGGAGCAGGCACAG GCTGGCACACAGCAGCACACGGGCTTGCAGCAGCTGGACTGGGAGCAGCCACAGGAGCCA CAGCCCCCCTTGGAGCCCCCACAGGAGCCACAGCCCCCCTTGGAGCCCCCGCAGGAGCCA CAGCCCCCTTTGCCACAGCCGGAGCAGGCACAGGCTGGCACACAGCAGCACACGGGCTTG CAGCAGCACACAGGCACACAGCCGCTGGAGCCACAGCCCCCACAGCTGGAGCCACAGCCT CCGGAACAGCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACTGGCAGCAAATGGGGACACAGCAGCTGGCCTGGGAGCAGCAGGGTTGGCAGCAGCTG GACTGGCAACGACTAGACTGGCAGCAACCACAAGAGCCACAGCTGGAGCAGGCACAGGCT GGCACACAGCAGCACACGGGCCTGCAGCAGCTGGACTGGGAGCAGCCACAGGAGCCACAG CCCCCCTTGGAGCCCCCACAGGAGCCACTGCCCCCTTTGCCACAGCCGGAGCAGGCACAG GCTGGCACACAGCAGCACACGGGCTTGCAGCAGCTGGACTGGGAGCAGCCACAGGAGCCA CAGCCCCCCTTGGAGCCCCCACAGGAGCCACAGCCCCCCTTGGAGCCCCCGCAGGAGCCA CAGCCCCCTTTGCCACAGCCGGAGCAGGCACAGGCTGGCACACAGCAGCACACGGGCTTG CAGCAGCACACAGGCACACAGCCGCTGGAGCCACAGCCCCCACAGCTGGAGCCACAGCCT CCGGAACAGCCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 128-327, - strand, RNAz p=0.999955 | |
| 286-387, - strand, RNAz p=0.998509 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 128-327, - strand, RNAz p=0.999955 | |
| 286-387, - strand, RNAz p=0.998509 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 89-492, gnl|bosTau2|chr26 (26247475-26247054) | |
| 128-482, gnl|bosTau2|chr26 (26204382-26204031) | |
| 128-482, gnl|Mm7|chr7 (138562962-138563272) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 89-492, gnl|bosTau2|chr26 (26247475-26247054) | |
| 128-482, gnl|bosTau2|chr26 (26204382-26204031) | |
| 128-482, gnl|Mm7|chr7 (138562962-138563272) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (1.65532) |