Non-Coding RNA Search

Ss1.1-pigca_0895.5

Sequence:


               
               AAAAGCTCCCTTTTTTAGGTAAGCATAGGCCTTGCTGTATGTAGATCTTTTGAGCAACAC
TACATAAAATGATATTTAGTTGACTTAGCTACAGCAGTACAGTGATTAGTAGTGTAAAAA
TTAATCTAAGGAATGTAGCGTGGGTTTGTCAAAATATCAAGTAGAATTTTGTTTCTAAAG
CATATTTAATGTGGGTAATCTAAAGAATGCAGTATCTATCCTATATTAAAAACAAGATAA
AACACAGAGTACCATTCACCCCCATTTACTATTAGACTGGGTAGACTTTAGTCCTTTTGG
ACTAAATTATAGTTGTTATGGTAACTACACATGTTTACTGAGTTTTGTCTAATCCCAATC
ATTGCACTTCCTTCAATTAAATTTTTCTACAGCCACATTGAGGAATAGCACTCTGCATGT
TTATTTCTTAAATTGCAGTCCTAAACCAGGAATTGTGTTTTAACAAGGATGAACTTAGTG
AAAATAAAATGAAAGTTTGCTATGTATTCATTAAAAAAAAAGACTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGCTCCCTTTTTTAGGTAAGCATAGGCCTTGCTGTATGTAGATCTTTTGAGCAACAC
TACATAAAATGATATTTAGTTGACTTAGCTACAGCAGTACAGTGATTAGTAGTGTAAAAA
TTAATCTAAGGAATGTAGCGTGGGTTTGTCAAAATATCAAGTAGAATTTTGTTTCTAAAG
CATATTTAATGTGGGTAATCTAAAGAATGCAGTATCTATCCTATATTAAAAACAAGATAA
AACACAGAGTACCATTCACCCCCATTTACTATTAGACTGGGTAGACTTTAGTCCTTTTGG
ACTAAATTATAGTTGTTATGGTAACTACACATGTTTACTGAGTTTTGTCTAATCCCAATC
ATTGCACTTCCTTCAATTAAATTTTTCTACAGCCACATTGAGGAATAGCACTCTGCATGT
TTATTTCTTAAATTGCAGTCCTAAACCAGGAATTGTGTTTTAACAAGGATGAACTTAGTG
AAAATAAAATGAAAGTTTGCTATGTATTCATTAAAAAAAAAGACTTTC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-521, gnl|bosTau2|chrX (8143227-8142700)
               

               
               1-521, gnl|Hg17|chr1 (24913568-24914125)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-521, gnl|bosTau2|chrX (8143227-8142700)
               

               
               1-521, gnl|Hg17|chr1 (24913568-24914125)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               clu (0.239292)
               

               
               fhi (0.169578)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.239292)
               

               
               fhi (0.169578)
               

               
               ebs (0.118301)

	1-521, gnl\|bosTau2\|chrX (8143227-8142700)
	1-521, gnl\|Hg17\|chr1 (24913568-24914125)