Non-Coding RNA Search

Ss1.1-ramn3511b_k4.5

Sequence:


               
               CATTGTAGACCAAATGTGATTTTAAATGAAATTGTTGAGTTATTGGTGAATTTTTTGAAT
TGTAAACTGATTTCCAGTGTACCGTTCATTGTCTTAGTTTTTGTTTGTTGGTTTGTTTTT
GTTTTTGTTTAACTGATTGGGTCCATCTCATTGTACAATGTTTTAGTTGCGAGCAGCAAG
TAGAATTTGGTGTAAACCAGGTTATTTCCATATTGAAAGGAATGCAGTTGAAATTGTAGA
TTTAGGATTGTTAACCGTACATGACAATTCTAACTTGACTATTCTAACCTATTGTATACA
ATCTGATTTTTTTAAATTGTAGACATGTTTAATCTCGGTTTCAATGTGTTTTTAAAAGTG
TTACTGTTTAAAAAATGAAAAAAAAATGAAGCAAATCTGCTAAAGAGCTGTCAGTTTTCA
TTACTGACTCTGTAAAATACACTGTTCTTTGTGTACTGTGTGTTATTTTGCCAGCTGCTG
CATTAGCCTTTAAAAGTATTTGGAAACTTATGATGAACTACATTTCTTGCAAAGTATATT
CCTTCTGTGGTATTTTGTCCTGTAACTGAAGTATAGTAATTATTTTATGGAAATGTTAGC
ACTTCTGTACCAACTTTGAATAAAATGAAAAATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTGTAGACCAAATGTGATTTTAAATGAAATTGTTGAGTTATTGGTGAATTTTTTGAAT
TGTAAACTGATTTCCAGTGTACCGTTCATTGTCTTAGTTTTTGTTTGTTGGTTTGTTTTT
GTTTTTGTTTAACTGATTGGGTCCATCTCATTGTACAATGTTTTAGTTGCGAGCAGCAAG
TAGAATTTGGTGTAAACCAGGTTATTTCCATATTGAAAGGAATGCAGTTGAAATTGTAGA
TTTAGGATTGTTAACCGTACATGACAATTCTAACTTGACTATTCTAACCTATTGTATACA
ATCTGATTTTTTTAAATTGTAGACATGTTTAATCTCGGTTTCAATGTGTTTTTAAAAGTG
TTACTGTTTAAAAAATGAAAAAAAAATGAAGCAAATCTGCTAAAGAGCTGTCAGTTTTCA
TTACTGACTCTGTAAAATACACTGTTCTTTGTGTACTGTGTGTTATTTTGCCAGCTGCTG
CATTAGCCTTTAAAAGTATTTGGAAACTTATGATGAACTACATTTCTTGCAAAGTATATT
CCTTCTGTGGTATTTTGTCCTGTAACTGAAGTATAGTAATTATTTTATGGAAATGTTAGC
ACTTCTGTACCAACTTTGAATAAAATGAAAAATTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-636, gnl|bosTau2|chr16 (19207079-19207708)
               

               
               1-636, gnl|Hg17|chr21 (34399804-34400429)
               

               
               1-636, gnl|Mm7|chr16 (92137235-92137819)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-636, gnl|bosTau2|chr16 (19207079-19207708)
               

               
               1-636, gnl|Hg17|chr21 (34399804-34400429)
               

               
               1-636, gnl|Mm7|chr16 (92137235-92137819)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               amn (0.417711)
               

               
               eye (0.170503)
               

               
               fco (0.157208)
               

               
               tra (0.123092)
               

               
               cty (0.10408)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               eye (0.170503)
               

               
               fco (0.157208)
               

               
               tra (0.123092)
               

               
               cty (0.10408)

	1-636, gnl\|bosTau2\|chr16 (19207079-19207708)
	1-636, gnl\|Hg17\|chr21 (34399804-34400429)
	1-636, gnl\|Mm7\|chr16 (92137235-92137819)

	amn (0.417711)
	eye (0.170503)
	fco (0.157208)
	tra (0.123092)
	cty (0.10408)