Non-Coding RNA Search

Ss1.1-ramn3513b_p15.5

Sequence:


               
               CGGGCTGCAGGTTTAGAATCATGATTGTGCAAAACATCCTCACCCGACCTCATCTTCTCT
GTCCTCTTTTGCATGTGTCCTTGCACTCTGACTTGGTAACGTTTGTTTTTTGAAATAAGG
TTCTTACCCAGATTCACCTAGTGCAGGCACCCACCCTGTGACTAGAGGGATAAATTGGAA
AGAGAGCTCGATCCTGTCAAATTGTGGAAGGAAATGGGTTAAAAACTGGTAGCATTCTAG
AGTGAGCTGCTTGGAGATAAAGCCAAAAAGTGGCGTGGGATGTCCCCTTTCCAAGATGGT
TCCATTTTGCATTGCCCGGTGGACCTGCTGGCTGATTGTCTTGGAGACCGCCGGTCTCCT
TAGGTGAGAATGGCGTGTGTGTTTCTCATGACAAGCCTGAAAGTGTTCTCTGAGCCTTGC
TTTAGGTGCTTTGGAGTAATGCTTGTCGACCCGAATAATGAGAATTTATGAGCTCACGAA
GGAACTGTGCTTTTGTTTCTGCCTGACCAACTTATGAATTTGTGTCTACCTCATTTTCAT
ATTAAAGTTTGCAGCTTCTGTAGGTAGGAAGAGAAAATGCCTGACATCAGTATTTTATCA
CCTCACCACATCTGTCTCTAGCAAAAATAAAGATTGTAAATATCACTACCCCACTTTCGG
AATACAATTTTAAGCAGCCAAGCCTAGTATTATCTGAATATTTTGAGCAGTACAGATTTC
TATGTTTATATAATAAAGCATATTTATTTTTTCCCTGTTATTTAATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCTGCAGGTTTAGAATCATGATTGTGCAAAACATCCTCACCCGACCTCATCTTCTCT
GTCCTCTTTTGCATGTGTCCTTGCACTCTGACTTGGTAACGTTTGTTTTTTGAAATAAGG
TTCTTACCCAGATTCACCTAGTGCAGGCACCCACCCTGTGACTAGAGGGATAAATTGGAA
AGAGAGCTCGATCCTGTCAAATTGTGGAAGGAAATGGGTTAAAAACTGGTAGCATTCTAG
AGTGAGCTGCTTGGAGATAAAGCCAAAAAGTGGCGTGGGATGTCCCCTTTCCAAGATGGT
TCCATTTTGCATTGCCCGGTGGACCTGCTGGCTGATTGTCTTGGAGACCGCCGGTCTCCT
TAGGTGAGAATGGCGTGTGTGTTTCTCATGACAAGCCTGAAAGTGTTCTCTGAGCCTTGC
TTTAGGTGCTTTGGAGTAATGCTTGTCGACCCGAATAATGAGAATTTATGAGCTCACGAA
GGAACTGTGCTTTTGTTTCTGCCTGACCAACTTATGAATTTGTGTCTACCTCATTTTCAT
ATTAAAGTTTGCAGCTTCTGTAGGTAGGAAGAGAAAATGCCTGACATCAGTATTTTATCA
CCTCACCACATCTGTCTCTAGCAAAAATAAAGATTGTAAATATCACTACCCCACTTTCGG
AATACAATTTTAAGCAGCCAAGCCTAGTATTATCTGAATATTTTGAGCAGTACAGATTTC
TATGTTTATATAATAAAGCATATTTATTTTTTCCCTGTTATTTAATTT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               15-299, gnl|bosTau2|chr22 (27903087-27902812)
               


               
               325-768, gnl|bosTau2|chr22 (27902566-27902120)
               

               
               325-768, gnl|Hg17|chr3 (64551600-64551156)
               

               
               325-768, gnl|Mm7|chr6 (92934318-92933892)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-299, gnl|bosTau2|chr22 (27903087-27902812)
               


               
               325-768, gnl|bosTau2|chr22 (27902566-27902120)
               

               
               325-768, gnl|Hg17|chr3 (64551600-64551156)
               

               
               325-768, gnl|Mm7|chr6 (92934318-92933892)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               amn (0.417711)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)

	15-299, gnl\|bosTau2\|chr22 (27903087-27902812)

	325-768, gnl\|bosTau2\|chr22 (27902566-27902120)
	325-768, gnl\|Hg17\|chr3 (64551600-64551156)
	325-768, gnl\|Mm7\|chr6 (92934318-92933892)