Ss1.1-ramn3540b_i19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAATAACCCCTACTATAATGGTGCCCCATCTTAATTTGAAAGCCTTTGAGAATCTTTTA GGACAAGCTCTGACTAAGGCACTTGAAGAGTCCAGCTGCCTGAAAAGGAGTGGCAGGGAC AGTGGTTACAGCGATATCTGGTGTGCTGAGCGAGGAGAATTTACCTGCTCCTCCAGGCAA CTATAATAGAGAAGATTCATTTGAAAGCTTGGACTCTTTGGGGTCCAGGTCATTCACAAG CTGCTCCTCTGATATCACATTGAGGGGGGCACGTGAAGGTTGTGAAAGTGACACAGATTC CGAATTTACATTCAAGATGCAGGATCATAATAGAGATGATATGTCCTACCGAAGGATTTC GGCTATTGAACCAAAGTCTGCGTTACCCTTCAATCGCTTTTTACCCAACAAGAGTAGGCA GCCATCCTATGTACCGGCACCCTTGAGGAAGAAAAAGCTGGACAAAAATGAAAATAACAG AAGAAGCTGGGCAAGCCCGGTCTACACGGAAGCAGATGGAACATTTCCAAGACTCTTTCA AAAGATTTATGGTGAGAACGGGAGCAAGTCCCTGAGCGATGTCAGCGCCGAGGATGTTCA GAACTTGCGTCAGCTGCGTTATGAGGAGATGCAGAAAATCAAGTCACAATTAAAAGAACA AGATCAGAAATGGCAAGATGACCTTGCAAAATGGAAAGATCGTCGAAAAAGCTACACTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAATAACCCCTACTATAATGGTGCCCCATCTTAATTTGAAAGCCTTTGAGAATCTTTTA GGACAAGCTCTGACTAAGGCACTTGAAGAGTCCAGCTGCCTGAAAAGGAGTGGCAGGGAC AGTGGTTACAGCGATATCTGGTGTGCTGAGCGAGGAGAATTTACCTGCTCCTCCAGGCAA CTATAATAGAGAAGATTCATTTGAAAGCTTGGACTCTTTGGGGTCCAGGTCATTCACAAG CTGCTCCTCTGATATCACATTGAGGGGGGCACGTGAAGGTTGTGAAAGTGACACAGATTC CGAATTTACATTCAAGATGCAGGATCATAATAGAGATGATATGTCCTACCGAAGGATTTC GGCTATTGAACCAAAGTCTGCGTTACCCTTCAATCGCTTTTTACCCAACAAGAGTAGGCA GCCATCCTATGTACCGGCACCCTTGAGGAAGAAAAAGCTGGACAAAAATGAAAATAACAG AAGAAGCTGGGCAAGCCCGGTCTACACGGAAGCAGATGGAACATTTCCAAGACTCTTTCA AAAGATTTATGGTGAGAACGGGAGCAAGTCCCTGAGCGATGTCAGCGCCGAGGATGTTCA GAACTTGCGTCAGCTGCGTTATGAGGAGATGCAGAAAATCAAGTCACAATTAAAAGAACA AGATCAGAAATGGCAAGATGACCTTGCAAAATGGAAAGATCGTCGAAAAAGCTACACTTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 277-531, gnl|bosTau2|chr12 (26614596-26614342) | |
| 277-531, gnl|canFam2|chr22 (32515284-32515569) | |
| 277-531, gnl|danRer3|chr11 (25251327-25251599) | |
| 277-531, gnl|dasNov1|scaffold_15729 (402-703) | |
| 277-531, gnl|echTel1|scaffold_291570 (63167-63469) | |
| 277-531, gnl|fr1|chrUn (155164856-155165129) | |
| 277-531, gnl|galGal2|chr1 (151605949-151605663) | |
| 277-531, gnl|hg17|chr13 (75276407-75276690) | |
| 277-531, gnl|Hg17|chr13 (75276424-75276678) | |
| 277-531, gnl|loxAfr1|scaffold_7424 (41930-41642) | |
| 277-531, gnl|mm7|chr14 (96300169-96300449) | |
| 277-531, gnl|Mm7|chr14 (96300183-96300437) | |
| 277-531, gnl|monDom2|scaffold_8 (12802865-12803147) | |
| 277-531, gnl|oryCun1|scaffold_205940 (82383-82099) | |
| 277-531, gnl|panTro1|chr14 (57859204-57859487) | |
| 277-531, gnl|rheMac2|chr17 (56254317-56254600) | |
| 277-531, gnl|rn3|chr15 (85892096-85892375) | |
| 277-531, gnl|xenTro1|scaffold_107 (164662-164379) | |
| 561-680, gnl|bosTau2|chr12 (26602238-26602119) | |
| 561-680, gnl|Hg17|chr13 (75289297-75289416) | |
| 561-680, gnl|Mm7|chr14 (96312489-96312608) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 277-531, gnl|bosTau2|chr12 (26614596-26614342) | |
| 277-531, gnl|canFam2|chr22 (32515284-32515569) | |
| 277-531, gnl|danRer3|chr11 (25251327-25251599) | |
| 277-531, gnl|dasNov1|scaffold_15729 (402-703) | |
| 277-531, gnl|echTel1|scaffold_291570 (63167-63469) | |
| 277-531, gnl|fr1|chrUn (155164856-155165129) | |
| 277-531, gnl|galGal2|chr1 (151605949-151605663) | |
| 277-531, gnl|hg17|chr13 (75276407-75276690) | |
| 277-531, gnl|Hg17|chr13 (75276424-75276678) | |
| 277-531, gnl|loxAfr1|scaffold_7424 (41930-41642) | |
| 277-531, gnl|mm7|chr14 (96300169-96300449) | |
| 277-531, gnl|Mm7|chr14 (96300183-96300437) | |
| 277-531, gnl|monDom2|scaffold_8 (12802865-12803147) | |
| 277-531, gnl|oryCun1|scaffold_205940 (82383-82099) | |
| 277-531, gnl|panTro1|chr14 (57859204-57859487) | |
| 277-531, gnl|rheMac2|chr17 (56254317-56254600) | |
| 277-531, gnl|rn3|chr15 (85892096-85892375) | |
| 277-531, gnl|xenTro1|scaffold_107 (164662-164379) | |
| 561-680, gnl|bosTau2|chr12 (26602238-26602119) | |
| 561-680, gnl|Hg17|chr13 (75289297-75289416) | |
| 561-680, gnl|Mm7|chr14 (96312489-96312608) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) |