Non-Coding RNA Search

Ss1.1-raor013_h20.5

Sequence:


               
               CGCGGTGGCGGCCGCGGCTCGAGCTTTAATTGTTGTAATTTAGTTACTTTCTAAAGATGC
CAAAGGAAACAGATTTTTTCTTTATTTATTTTAAATAGTTAAAACCCTGTACTTTATGTT
TTTGAAGTAAGGTTGAAATTGTGTGAAAATGTGGACAGCTTTGTTCCATTGTTGATTAGA
ATTAATTTTTTTTTTTTTTTTAGTGGAGGGTGGCATGGTAATATTAGTACTATTTGGATT
ATTTTAAATATCAAACACTTCTACCCAGTTTACTATTTGCCTATAGTAATGTTATCAGGG
TATATTTAATTGTCCTGTGGTTTGACAGATGAGAGAGAACTCAGAAGTTACTAAAGGTCA
AGCATTACATACTTTGCTCTTGGAGGCAGCTATACCTTCCTTGCCTATGACTTTTATGCA
CATTAGCCCCTTAGGCTATACTCATCTAACTACAGTTTAACATCACCAGTGCCCAGGAAA
TGGAAAAGTACAATATTTGGTATGAGAGGTTTTCCATAGGATTTTTCATGTCAAAAATTT
ACCTCGTTTACATTTAATGTATCATCTCTTTCCTTTCTGGTACATTTCCCACTGTCATCT
TCTGTTGTTTTTTTCATATTTTTCTACAGGTAGATTTATTTCCACAAACATAGAAATAAA
GACAATTGCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGGTGGCGGCCGCGGCTCGAGCTTTAATTGTTGTAATTTAGTTACTTTCTAAAGATGC
CAAAGGAAACAGATTTTTTCTTTATTTATTTTAAATAGTTAAAACCCTGTACTTTATGTT
TTTGAAGTAAGGTTGAAATTGTGTGAAAATGTGGACAGCTTTGTTCCATTGTTGATTAGA
ATTAATTTTTTTTTTTTTTTTAGTGGAGGGTGGCATGGTAATATTAGTACTATTTGGATT
ATTTTAAATATCAAACACTTCTACCCAGTTTACTATTTGCCTATAGTAATGTTATCAGGG
TATATTTAATTGTCCTGTGGTTTGACAGATGAGAGAGAACTCAGAAGTTACTAAAGGTCA
AGCATTACATACTTTGCTCTTGGAGGCAGCTATACCTTCCTTGCCTATGACTTTTATGCA
CATTAGCCCCTTAGGCTATACTCATCTAACTACAGTTTAACATCACCAGTGCCCAGGAAA
TGGAAAAGTACAATATTTGGTATGAGAGGTTTTCCATAGGATTTTTCATGTCAAAAATTT
ACCTCGTTTACATTTAATGTATCATCTCTTTCCTTTCTGGTACATTTCCCACTGTCATCT
TCTGTTGTTTTTTTCATATTTTTCTACAGGTAGATTTATTTCCACAAACATAGAAATAAA
GACAATTGCTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               33-672, gnl|bosTau2|chrX (41497483-41498134)
               

               
               33-672, gnl|Hg17|chr4 (39604344-39604980)
               

               
               33-672, gnl|Mm7|chr5 (64951365-64951996)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-672, gnl|bosTau2|chrX (41497483-41498134)
               

               
               33-672, gnl|Hg17|chr4 (39604344-39604980)
               

               
               33-672, gnl|Mm7|chr5 (64951365-64951996)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               aor (0.195274)
               

               
               fbs (0.175346)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               fbs (0.175346)

	33-672, gnl\|bosTau2\|chrX (41497483-41498134)
	33-672, gnl\|Hg17\|chr4 (39604344-39604980)
	33-672, gnl\|Mm7\|chr5 (64951365-64951996)