Non-Coding RNA Search

Ss1.1-raor015_j22.5

Sequence:


               
               TTTCCTATTTCCTTCCAGCCCTGAGTAGCCCTCTCTAAACTATGACTGTACAATATGTTT
TAGGTTGAGGGCATGGTTGGACATATCATTGGCATGGAAATCTGTTGTTTATTGCACACA
TGTGCTCCAGCCTGTAGCCTCACAACAAGACGGTGAAGAGCTACTTGTGTATTACACTCC
ACACACTCCAGGATGTGGAACCCTGCTTCCCCAAAGGCAACTGCTCAAGAACATCAGTGG
TTCCTTTTCATGGGTACAGCTAGTTTGTTGGGGTTTTTCCAGATCTAGCCACTTCAGATG
ATGCCCCCACCAAACTAAAGCCAAGTAGGGTACATATATTATGTGGAGATGTCCAATGAA
GCTGAAATATATTTAAATGTATTTAATTCATCTCTCAACACTTAACTCTCATTTCCTTAA
TTTTCTTCATCACCCGTATTATATATTAATCAAAACAAAGGTGTTAGTAGAGAAAGTTCT
GATATTTTTTCTCTTCAGGCTTATTCTTGTTTGAATATTTGATGTATAACGAAAAAAATC
ATTTGTTTTCGCAGTGTTGTTAGCAAACCAAACTTGGGCCCGCTTGCCCATGCACAGTAA
AGCCAATCTACTGACACTGGGTTGTGGTGAAAGTGCAGCATTTATTGCAGGGCTCCAAAT
AAGGAGTCCAGGCAGCTAGTGCGCAAAAGGCCTAGACTCATTGATGGCTTTTAGACGAGG
GTTTTAAATACAGGGTGAGGGAGGGGAGACTGTGGGGTGTGTGATCTGCTCATAGACATT
CTTCTGATTGGTTGGTGGTGAGGTAATCAGAGTCAACATCATCAATCTGCTTCCAACCCA
TCTAAGGTCTACTTGCTTGTGGGCATACAGTTAATTTCTCCCACCTGATGGAGGTTTCGG
TATCTGCAGAACAGCTCAAAGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCCTATTTCCTTCCAGCCCTGAGTAGCCCTCTCTAAACTATGACTGTACAATATGTTT
TAGGTTGAGGGCATGGTTGGACATATCATTGGCATGGAAATCTGTTGTTTATTGCACACA
TGTGCTCCAGCCTGTAGCCTCACAACAAGACGGTGAAGAGCTACTTGTGTATTACACTCC
ACACACTCCAGGATGTGGAACCCTGCTTCCCCAAAGGCAACTGCTCAAGAACATCAGTGG
TTCCTTTTCATGGGTACAGCTAGTTTGTTGGGGTTTTTCCAGATCTAGCCACTTCAGATG
ATGCCCCCACCAAACTAAAGCCAAGTAGGGTACATATATTATGTGGAGATGTCCAATGAA
GCTGAAATATATTTAAATGTATTTAATTCATCTCTCAACACTTAACTCTCATTTCCTTAA
TTTTCTTCATCACCCGTATTATATATTAATCAAAACAAAGGTGTTAGTAGAGAAAGTTCT
GATATTTTTTCTCTTCAGGCTTATTCTTGTTTGAATATTTGATGTATAACGAAAAAAATC
ATTTGTTTTCGCAGTGTTGTTAGCAAACCAAACTTGGGCCCGCTTGCCCATGCACAGTAA
AGCCAATCTACTGACACTGGGTTGTGGTGAAAGTGCAGCATTTATTGCAGGGCTCCAAAT
AAGGAGTCCAGGCAGCTAGTGCGCAAAAGGCCTAGACTCATTGATGGCTTTTAGACGAGG
GTTTTAAATACAGGGTGAGGGAGGGGAGACTGTGGGGTGTGTGATCTGCTCATAGACATT
CTTCTGATTGGTTGGTGGTGAGGTAATCAGAGTCAACATCATCAATCTGCTTCCAACCCA
TCTAAGGTCTACTTGCTTGTGGGCATACAGTTAATTTCTCCCACCTGATGGAGGTTTCGG
TATCTGCAGAACAGCTCAAAGGAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               558-923, gnl|bosTau2|chr12 (24544697-24545055)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               558-923, gnl|bosTau2|chr12 (24544697-24545055)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               ece (0.229305)
               

               
               aor (0.195274)
               

               
               lin (0.145603)
               

               
               csk (0.140746)
               

               
               cbr (0.127975)
               

               
               med (0.116252)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               aor (0.195274)
               

               
               lin (0.145603)
               

               
               csk (0.140746)
               

               
               cbr (0.127975)
               

               
               med (0.116252)

	ece (0.229305)
	aor (0.195274)
	lin (0.145603)
	csk (0.140746)
	cbr (0.127975)
	med (0.116252)