Non-Coding RNA Search

Ss1.1-raor016_o12.5

Sequence:


               
               TTGACATTGATTTAAGTAATGGTACTATATTTTAAAAGACATATTGAATTGTGAAGGCAA
TAAGATGCCTTCTATATGTAATGACCACAGAACTAACCCTTATAATATAGTTTTACTTAT
TTTGTTTACTCTAAAAAGCTATAGCAGAGTTCCTCTATTTTATATTTCATAGATTTAAAA
AAAAACCCAAATAAAGATGGATTTAAAATTCACTGTGCAAAAGAGTATTGAGTAACAAAC
TGAGTTTAAAAAGCAAGAATTTCCTTAGTAATTTGGAATATTCTACATGGCTTTATCCCA
GAGCACATGAGACCAAGATTTAGGGCTGTCCTCAACATCACTGCCGTCTCACGCAGGCTA
CACACATTAGGTATTATGAAGAACATCAACCCAAACTTTTCTTCTTTTGTTTGCACTGAT
GCTAATATTTTGCCCTTTTATGTTTATATGACATGTCTGTGTTGTGTGGGGGAAGGTTGT
TTTTTTGTTTTGTTTTGTTTTTTTTTGTTTTTTTTTTTTTGTTTTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGACATTGATTTAAGTAATGGTACTATATTTTAAAAGACATATTGAATTGTGAAGGCAA
TAAGATGCCTTCTATATGTAATGACCACAGAACTAACCCTTATAATATAGTTTTACTTAT
TTTGTTTACTCTAAAAAGCTATAGCAGAGTTCCTCTATTTTATATTTCATAGATTTAAAA
AAAAACCCAAATAAAGATGGATTTAAAATTCACTGTGCAAAAGAGTATTGAGTAACAAAC
TGAGTTTAAAAAGCAAGAATTTCCTTAGTAATTTGGAATATTCTACATGGCTTTATCCCA
GAGCACATGAGACCAAGATTTAGGGCTGTCCTCAACATCACTGCCGTCTCACGCAGGCTA
CACACATTAGGTATTATGAAGAACATCAACCCAAACTTTTCTTCTTTTGTTTGCACTGAT
GCTAATATTTTGCCCTTTTATGTTTATATGACATGTCTGTGTTGTGTGGGGGAAGGTTGT
TTTTTTGTTTTGTTTTGTTTTTTTTTGTTTTTTTTTTTTTGTTTTGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-518, gnl|bosTau2|chr10 (24256683-24256156)
               

               
               1-518, gnl|Hg17|chrX (17512761-17513291)
               

               
               1-518, gnl|Mm7|chrX (156608660-156608121)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-518, gnl|bosTau2|chr10 (24256683-24256156)
               

               
               1-518, gnl|Hg17|chrX (17512761-17513291)
               

               
               1-518, gnl|Mm7|chrX (156608660-156608121)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               aor (0.195274)
               

               
               liv (0.146284)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               liv (0.146284)
               

               
               kid (0.129735)

	1-518, gnl\|bosTau2\|chr10 (24256683-24256156)
	1-518, gnl\|Hg17\|chrX (17512761-17513291)
	1-518, gnl\|Mm7\|chrX (156608660-156608121)