Non-Coding RNA Search

Ss1.1-raor017_f10.5

Sequence:


               
               CACGCGCATACACACACACACACACACAGATACAGGCACCCACCTAGACACACCACACGA
GAGAGAAAAAAAAAACTGATGCAAAAAACAAGCGATGTCTTCTTACCGCGCAAGTGAAAA
TCAAGTCCGGTAGCCGTTAGGGAAGGAAATAGTGGTACGAATCTTTTTCTGTCTGTCAGA
ACCATTTGATCCACATGAACATGAAACAAAAACAAAAAGTTCCGGAAGCTGCCATTAGTA
TTGTGGTGGATTTTTAAAAGATAAAAGGCACATTGATGGACAAACTAAAACATGGCAAAA
AAGGAAAAAAAACAAAAAACTCCTATACTGCCCTCAAAATGGAGTTTGCAATTAATGTCA
GTCAGGATTCATCTTTGCAAAAATCAATGATTTCCACATTCAGCCAGTGTAGCCAGCAGA
AATTTCTGATCCACAGTGCATGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACGCGCATACACACACACACACACACAGATACAGGCACCCACCTAGACACACCACACGA
GAGAGAAAAAAAAAACTGATGCAAAAAACAAGCGATGTCTTCTTACCGCGCAAGTGAAAA
TCAAGTCCGGTAGCCGTTAGGGAAGGAAATAGTGGTACGAATCTTTTTCTGTCTGTCAGA
ACCATTTGATCCACATGAACATGAAACAAAAACAAAAAGTTCCGGAAGCTGCCATTAGTA
TTGTGGTGGATTTTTAAAAGATAAAAGGCACATTGATGGACAAACTAAAACATGGCAAAA
AAGGAAAAAAAACAAAAAACTCCTATACTGCCCTCAAAATGGAGTTTGCAATTAATGTCA
GTCAGGATTCATCTTTGCAAAAATCAATGATTTCCACATTCAGCCAGTGTAGCCAGCAGA
AATTTCTGATCCACAGTGCATGGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               32-444, gnl|bosTau2|chr10 (68418605-68418204)
               

               
               32-444, gnl|Hg17|chr14 (88697685-88697256)
               

               
               32-444, gnl|Mm7|chr12 (96690301-96689899)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-444, gnl|bosTau2|chr10 (68418605-68418204)
               

               
               32-444, gnl|Hg17|chr14 (88697685-88697256)
               

               
               32-444, gnl|Mm7|chr12 (96690301-96689899)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               pro (0.512033)
               

               
               aor (0.195274)
               

               
               bfe (0.149858)
               

               
               ese (0.126502)
               

               
               jca (0.11396)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               aor (0.195274)
               

               
               bfe (0.149858)
               

               
               ese (0.126502)
               

               
               jca (0.11396)

	32-444, gnl\|bosTau2\|chr10 (68418605-68418204)
	32-444, gnl\|Hg17\|chr14 (88697685-88697256)
	32-444, gnl\|Mm7\|chr12 (96690301-96689899)

	pro (0.512033)
	aor (0.195274)
	bfe (0.149858)
	ese (0.126502)
	jca (0.11396)