Non-Coding RNA Search

Ss1.1-raor031_m17.5

Sequence:


               
               GATTATGGCCGATATGACATGGCTCAGCTTCGGTTCAAAAAAGGTCAGTGTCTGTCGGAA
AATTTCTATGTGAGAGGTGATGGCACCAGAGTTTACTTCTTCACACAAGATGAACTGGAC
ACACTTTTCACTACTGCTGGACTGGAAAAGGTTCAGAACTTGGTGGATCGCCGGTTACAA
GTGAATCGAGGGAAACAACTGACCATGTACCGAGTTTGGATTCAGTGCAAATATCGCAAG
CCTATTCTGTCCAACACTGGCTGAGAGGCATCTGCTCCTGATATGCGAGCTCATTGAGGC
TTTTTTAAAAGAATGGTGTCTTGTTGATATTGAACTATTCAAGGATGCAAACAGACTTGA
ACCTGGGAAAAATTATTTTTTATCAAGATTCTTAGCATTTTGCTTCATATCTGTGAAGCC
CTGTGATATGTACTTTTCTCGAGTTTTTTTCTTACTTGGAGATCTCAAAACCTTTCTTGC
TGTTTGTAACTTATCTTAATAATTGAAATGTTATTCATGGGTGTCAAGAATTTATTTACA
TTTGGAAGTATTATATATGATAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTATGGCCGATATGACATGGCTCAGCTTCGGTTCAAAAAAGGTCAGTGTCTGTCGGAA
AATTTCTATGTGAGAGGTGATGGCACCAGAGTTTACTTCTTCACACAAGATGAACTGGAC
ACACTTTTCACTACTGCTGGACTGGAAAAGGTTCAGAACTTGGTGGATCGCCGGTTACAA
GTGAATCGAGGGAAACAACTGACCATGTACCGAGTTTGGATTCAGTGCAAATATCGCAAG
CCTATTCTGTCCAACACTGGCTGAGAGGCATCTGCTCCTGATATGCGAGCTCATTGAGGC
TTTTTTAAAAGAATGGTGTCTTGTTGATATTGAACTATTCAAGGATGCAAACAGACTTGA
ACCTGGGAAAAATTATTTTTTATCAAGATTCTTAGCATTTTGCTTCATATCTGTGAAGCC
CTGTGATATGTACTTTTCTCGAGTTTTTTTCTTACTTGGAGATCTCAAAACCTTTCTTGC
TGTTTGTAACTTATCTTAATAATTGAAATGTTATTCATGGGTGTCAAGAATTTATTTACA
TTTGGAAGTATTATATATGATAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26326727|dbj|BAC27107.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26326727|dbj|BAC27107.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               102-564, gnl|bosTau2|chr19 (39274018-39274479)
               

               
               102-564, gnl|Hg17|chr17 (57879660-57880291)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-564, gnl|bosTau2|chr19 (39274018-39274479)
               

               
               102-564, gnl|Hg17|chr17 (57879660-57880291)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cte (0.29274)
               

               
               aor (0.195274)
               

               
               tbr (0.154178)
               

               
               isp (0.150376)
               

               
               ski (0.146735)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               aor (0.195274)
               

               
               tbr (0.154178)
               

               
               isp (0.150376)
               

               
               ski (0.146735)

	102-564, gnl\|bosTau2\|chr19 (39274018-39274479)
	102-564, gnl\|Hg17\|chr17 (57879660-57880291)

	cte (0.29274)
	aor (0.195274)
	tbr (0.154178)
	isp (0.150376)
	ski (0.146735)