Non-Coding RNA Search

Ss1.1-raor036_m10.5

Sequence:


               
               ATAGTAATAAGCAGGTCACAATGTTGTAGTGAGGATTAGACAAGACAGAGTATATCAAGG
GCTTAGCCAAGTGACATGATCAGTAGGAAATGGGTGTTAACTTCTTATTGTTGTTATACC
ATCGACAACACTGCTACCATCAGTACTTGTTTATATATGTCTTCATTTATGAGTAGCAGT
GTTGTTTATAAAGGCAAAAGATCTAGAAACAGCCTAAATGCCCAACAACAGGGATGAGTT
CAATAAATTATAGTGCATATACATGTGATAAATTCATTTGAGTAATAAAAAAATAAATAA
ATTACAGTGCAACCATAAAGTGGAATATTATACAGTTAAAAGCATTCTTTTGCGCTCACT
TTGGAAGCACATACTAAAATTGGAGCCATACAGAGATGAGCATGGCCCTGTGAAGGATGA
CATGAAATCTGTGAAGCATTCTTTTTCAGAAAACACTTTTTTCTTTTTGTAGCTATATGC
GATGATGAATGTTAACTCATTGTGGTAACCATTTCACGACACCTGTAAATCAAGTCATTA
TGCTGCGTACTTTAAACTTATACATTGCTGTATATAATTATACCTCAATAAAACTGGGAA
AAACATTCTTTTTGAGAAAAGCTTAATGATAATAAGAAAGTCTCAAATGCAGAGTTAAGG
AAGAGAAGAAAGGTCCCTATTTAAATACAAAATGATAATAGGGTTTACCCCTGAATGGTG
GGACTATGAATGATTTTTATTTTCATACTTCTTTGCAATTATTTATTTATTTATTTATTG
TCTTTTTGCCTTTTCTAGGGCTGCTTCCTGCGGCATATGAAGGTTCCCAGGCTAGGGGTC
GAATCGGAACTATAGCCACCAGCCTATGCCAGAGCCACAGCAACACGGGATCCGAGCCGT
GTCTGCAACCTACACCACAGCTCAGGGCAACGCTGGATCCTTTAACCCACTGAGCAAGGG
CAGGGATCGAACCCGCAACCTCATGGTTCCTTGTTGGATTCGTTAACCACTGCGCCACGA
CGGGAACTCCCAACATTTACGTATTTAATAGATTTTTCCATAATAAAGATTTTAAAAAAG
AAAAAACAAAATGAGTAGACAACTGTGTAAAACCATGAGCACTGAGTTAGAAGTGGTGCT
AAAGGGAGCTCCCGTCACGGTTCAGTGGAAATGAATCTGATTAGTATCCATGAGAACACA
GGTTCAATCCCTGGCCTTGCTCAGTAGGTTAAGTGGGTTAAGGATCTGGTGTTGCCATGA
GCTGTGTGGGTATAGGTTGCAGACGTGGCTCAGATCTGGCTTGCCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGTAATAAGCAGGTCACAATGTTGTAGTGAGGATTAGACAAGACAGAGTATATCAAGG
GCTTAGCCAAGTGACATGATCAGTAGGAAATGGGTGTTAACTTCTTATTGTTGTTATACC
ATCGACAACACTGCTACCATCAGTACTTGTTTATATATGTCTTCATTTATGAGTAGCAGT
GTTGTTTATAAAGGCAAAAGATCTAGAAACAGCCTAAATGCCCAACAACAGGGATGAGTT
CAATAAATTATAGTGCATATACATGTGATAAATTCATTTGAGTAATAAAAAAATAAATAA
ATTACAGTGCAACCATAAAGTGGAATATTATACAGTTAAAAGCATTCTTTTGCGCTCACT
TTGGAAGCACATACTAAAATTGGAGCCATACAGAGATGAGCATGGCCCTGTGAAGGATGA
CATGAAATCTGTGAAGCATTCTTTTTCAGAAAACACTTTTTTCTTTTTGTAGCTATATGC
GATGATGAATGTTAACTCATTGTGGTAACCATTTCACGACACCTGTAAATCAAGTCATTA
TGCTGCGTACTTTAAACTTATACATTGCTGTATATAATTATACCTCAATAAAACTGGGAA
AAACATTCTTTTTGAGAAAAGCTTAATGATAATAAGAAAGTCTCAAATGCAGAGTTAAGG
AAGAGAAGAAAGGTCCCTATTTAAATACAAAATGATAATAGGGTTTACCCCTGAATGGTG
GGACTATGAATGATTTTTATTTTCATACTTCTTTGCAATTATTTATTTATTTATTTATTG
TCTTTTTGCCTTTTCTAGGGCTGCTTCCTGCGGCATATGAAGGTTCCCAGGCTAGGGGTC
GAATCGGAACTATAGCCACCAGCCTATGCCAGAGCCACAGCAACACGGGATCCGAGCCGT
GTCTGCAACCTACACCACAGCTCAGGGCAACGCTGGATCCTTTAACCCACTGAGCAAGGG
CAGGGATCGAACCCGCAACCTCATGGTTCCTTGTTGGATTCGTTAACCACTGCGCCACGA
CGGGAACTCCCAACATTTACGTATTTAATAGATTTTTCCATAATAAAGATTTTAAAAAAG
AAAAAACAAAATGAGTAGACAACTGTGTAAAACCATGAGCACTGAGTTAGAAGTGGTGCT
AAAGGGAGCTCCCGTCACGGTTCAGTGGAAATGAATCTGATTAGTATCCATGAGAACACA
GGTTCAATCCCTGGCCTTGCTCAGTAGGTTAAGTGGGTTAAGGATCTGGTGTTGCCATGA
GCTGTGTGGGTATAGGTTGCAGACGTGGCTCAGATCTGGCTTGCCATG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               296-754, gnl|bosTau2|chr22 (32695972-32696438)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               296-754, gnl|bosTau2|chr22 (32695972-32696438)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               aor (0.390549)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.390549)