Ss1.1-raor037_g14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGACTGGAAGTGGAAAGACCCATGTGTTTGACTTGCTGAACAGGAAAACAAAATTAAG AGTGCTCGAAGATGGAAAGCAACAGGTTCAAGTGGTGGGATTACAGGAACGGGAAGTCAA ATGTGTTGAAGATGTACTGAAACTCATTGACATAGGCAACAGTTGCAGGGTGAAAGAATT GACTGTGGATCCAACTGCTGCTGGTGATGTCCGTCCAATAATGCATCATCCACCAAATCA GATTGATGACCTAGAGGCACAGTGGGGTGTGGGGAGTTCCCCTCAGAGGGATGATCTAAA ACTTCTTTGTGAACAAAATGAAGAAGAGGTTTCTCCACAATTGTTTACTTTCCATGAAGC TGTCTCACAAATGGTAGAAATGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGACTGGAAGTGGAAAGACCCATGTGTTTGACTTGCTGAACAGGAAAACAAAATTAAG AGTGCTCGAAGATGGAAAGCAACAGGTTCAAGTGGTGGGATTACAGGAACGGGAAGTCAA ATGTGTTGAAGATGTACTGAAACTCATTGACATAGGCAACAGTTGCAGGGTGAAAGAATT GACTGTGGATCCAACTGCTGCTGGTGATGTCCGTCCAATAATGCATCATCCACCAAATCA GATTGATGACCTAGAGGCACAGTGGGGTGTGGGGAGTTCCCCTCAGAGGGATGATCTAAA ACTTCTTTGTGAACAAAATGAAGAAGAGGTTTCTCCACAATTGTTTACTTTCCATGAAGC TGTCTCACAAATGGTAGAAATGGA |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 26-169, gnl|bosTau2|chr20 (4296895-4296752) | |
| 26-169, gnl|canFam2|chr2 (51562890-51562750) | |
| 26-169, gnl|canFam2|chr2 (51562746-51562900) | |
| 26-169, gnl|danRer3|chr8 (4684428-4684291) | |
| 26-169, gnl|danRer3|chr8 (4684287-4684441) | |
| 26-169, gnl|dasNov1|scaffold_14929 (2483-2343) | |
| 26-169, gnl|dasNov1|scaffold_8206 (29833-29679) | |
| 26-169, gnl|echTel1|scaffold_279265 (91884-91744) | |
| 26-169, gnl|echTel1|scaffold_279265 (91740-91885) | |
| 26-169, gnl|fr1|chrUn (92179866-92180003) | |
| 26-169, gnl|fr1|chrUn (92180007-92179860) | |
| 26-169, gnl|galGal2|chrZ (2819108-2818969) | |
| 26-169, gnl|galGal2|chrZ (2818965-2819119) | |
| 26-169, gnl|hg17|chr5 (61694761-61694915) | |
| 26-169, gnl|Hg17|chr5 (61694762-61694905) | |
| 26-169, gnl|hg17|chrX (126588522-126588662) | |
| 26-169, gnl|loxAfr1|scaffold_9925 (34560-34420) | |
| 26-169, gnl|loxAfr1|scaffold_9925 (34416-34570) | |
| 26-169, gnl|mm7|chr10_random (2644826-2644688) | |
| 26-169, gnl|mm7|chr13 (104106552-104106398) | |
| 26-169, gnl|Mm7|chr13 (104106549-104106406) | |
| 26-169, gnl|monDom2|scaffold_27 (26702722-26702591) | |
| 26-169, gnl|monDom2|scaffold_27 (26702587-26702734) | |
| 26-169, gnl|oryCun1|scaffold_137766 (2633-2759) | |
| 26-169, gnl|oryCun1|scaffold_174197 (54519-54678) | |
| 26-169, gnl|panTro1|chr4 (54249269-54249115) | |
| 26-169, gnl|panTro1|chrX (130761640-130761780) | |
| 26-169, gnl|rheMac2|chr6 (60097244-60097398) | |
| 26-169, gnl|rheMac2|chrX (125924170-125924310) | |
| 26-169, gnl|rn3|chr17 (11007999-11008139) | |
| 26-169, gnl|rn3|chr2 (38015445-38015293) | |
| 26-169, gnl|tetNig1|chr12 (2900115-2899978) | |
| 26-169, gnl|tetNig1|chr12 (2899974-2900126) | |
| 26-169, gnl|xenTro1|scaffold_457 (495603-495743) | |
| 26-169, gnl|xenTro1|scaffold_457 (495747-495593) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 26-169, gnl|bosTau2|chr20 (4296895-4296752) | |
| 26-169, gnl|canFam2|chr2 (51562890-51562750) | |
| 26-169, gnl|canFam2|chr2 (51562746-51562900) | |
| 26-169, gnl|danRer3|chr8 (4684428-4684291) | |
| 26-169, gnl|danRer3|chr8 (4684287-4684441) | |
| 26-169, gnl|dasNov1|scaffold_14929 (2483-2343) | |
| 26-169, gnl|dasNov1|scaffold_8206 (29833-29679) | |
| 26-169, gnl|echTel1|scaffold_279265 (91884-91744) | |
| 26-169, gnl|echTel1|scaffold_279265 (91740-91885) | |
| 26-169, gnl|fr1|chrUn (92179866-92180003) | |
| 26-169, gnl|fr1|chrUn (92180007-92179860) | |
| 26-169, gnl|galGal2|chrZ (2819108-2818969) | |
| 26-169, gnl|galGal2|chrZ (2818965-2819119) | |
| 26-169, gnl|hg17|chr5 (61694761-61694915) | |
| 26-169, gnl|Hg17|chr5 (61694762-61694905) | |
| 26-169, gnl|hg17|chrX (126588522-126588662) | |
| 26-169, gnl|loxAfr1|scaffold_9925 (34560-34420) | |
| 26-169, gnl|loxAfr1|scaffold_9925 (34416-34570) | |
| 26-169, gnl|mm7|chr10_random (2644826-2644688) | |
| 26-169, gnl|mm7|chr13 (104106552-104106398) | |
| 26-169, gnl|Mm7|chr13 (104106549-104106406) | |
| 26-169, gnl|monDom2|scaffold_27 (26702722-26702591) | |
| 26-169, gnl|monDom2|scaffold_27 (26702587-26702734) | |
| 26-169, gnl|oryCun1|scaffold_137766 (2633-2759) | |
| 26-169, gnl|oryCun1|scaffold_174197 (54519-54678) | |
| 26-169, gnl|panTro1|chr4 (54249269-54249115) | |
| 26-169, gnl|panTro1|chrX (130761640-130761780) | |
| 26-169, gnl|rheMac2|chr6 (60097244-60097398) | |
| 26-169, gnl|rheMac2|chrX (125924170-125924310) | |
| 26-169, gnl|rn3|chr17 (11007999-11008139) | |
| 26-169, gnl|rn3|chr2 (38015445-38015293) | |
| 26-169, gnl|tetNig1|chr12 (2900115-2899978) | |
| 26-169, gnl|tetNig1|chr12 (2899974-2900126) | |
| 26-169, gnl|xenTro1|scaffold_457 (495603-495743) | |
| 26-169, gnl|xenTro1|scaffold_457 (495747-495593) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| aor (0.195274) | |
| sto (0.179824) |