Non-Coding RNA Search

Ss1.1-raor037_h18.5

Sequence:


               
               AGCTAAAGACCAAACCATGGAAGGACGGAGGCGGCTAGAGCAGAGACTGGATGAAATGGC
AGCCACAGCAGCTGAGGAGGAACAGTGCTCTGATGTCGACCGCTTCAGTGACGTCATTAA
GTTTGATGTCAATACTCACGTCTACTACTTCGCTCACCTCTGGGATGGCAACCCCCCCAT
GGCCCCTCCCAATCCGCGCTACAGCCACAATGCCCAGGAACTGAAAAGCAGGATCCTTGC
AACTGCCAAACAGGAGGCAAGGGGAAGCATCATGAAGATATCAGATGTCAAATTCCGAGT
TCAGGATCTGTGGAAAGCCCTGCTGAATGAGAACTTTGTTTTCAACTTCAGGAATACCCG
AGAGGTTACGGCTATGAGCAAACTGGAAACCATGTATAACAAATGGACGTGGGAGCTGAG
GAGTCATGTGCTGAGCCTGCAGGACCAGCTGATCAACCAGATTCAGAATGGAAAAATCCA
CACACTTGAAGCACACACACTTGCGGCTCCCGTTACAGACAAGTATGAGGCCATCAAGCA
AGAACTTGAAAAATATTTCAGTGAAGATCCAGATAGTGAAGTGCTGGTTCAATGGAAGGG
AAATTTTGAAAATAAGCTAATGATCCTTAAAGAGTCACTAATTTCAGACAGCCAAAGAAA
AGCCAAAGAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTAAAGACCAAACCATGGAAGGACGGAGGCGGCTAGAGCAGAGACTGGATGAAATGGC
AGCCACAGCAGCTGAGGAGGAACAGTGCTCTGATGTCGACCGCTTCAGTGACGTCATTAA
GTTTGATGTCAATACTCACGTCTACTACTTCGCTCACCTCTGGGATGGCAACCCCCCCAT
GGCCCCTCCCAATCCGCGCTACAGCCACAATGCCCAGGAACTGAAAAGCAGGATCCTTGC
AACTGCCAAACAGGAGGCAAGGGGAAGCATCATGAAGATATCAGATGTCAAATTCCGAGT
TCAGGATCTGTGGAAAGCCCTGCTGAATGAGAACTTTGTTTTCAACTTCAGGAATACCCG
AGAGGTTACGGCTATGAGCAAACTGGAAACCATGTATAACAAATGGACGTGGGAGCTGAG
GAGTCATGTGCTGAGCCTGCAGGACCAGCTGATCAACCAGATTCAGAATGGAAAAATCCA
CACACTTGAAGCACACACACTTGCGGCTCCCGTTACAGACAAGTATGAGGCCATCAAGCA
AGAACTTGAAAAATATTTCAGTGAAGATCCAGATAGTGAAGTGCTGGTTCAATGGAAGGG
AAATTTTGAAAATAAGCTAATGATCCTTAAAGAGTCACTAATTTCAGACAGCCAAAGAAA
AGCCAAAGAACT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-672, gnl|bosTau2|chr15 (28999183-28998512)
               

               
               1-672, gnl|Mm7|chr7 (101883056-101882385)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-672, gnl|bosTau2|chr15 (28999183-28998512)
               

               
               1-672, gnl|Mm7|chr7 (101883056-101882385)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               aor (0.195274)
               

               
               cje (0.165235)
               

               
               lnt (0.142308)
               

               
               cbl (0.114797)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               cje (0.165235)
               

               
               lnt (0.142308)
               

               
               cbl (0.114797)

	1-672, gnl\|bosTau2\|chr15 (28999183-28998512)
	1-672, gnl\|Mm7\|chr7 (101883056-101882385)