Non-Coding RNA Search

Ss1.1-raor037_l18.5

Sequence:


               
               CACGCTCCAGCATACTTACGTATTTACAGAAAACAGAGGGGGGAGACCCAGAGAGAGGAC
GGTGCTGAGATGTTTAGAGAGGATTTGGGAGTCGAGCTGCAGCAACATTAACGAGGAAAG
GGAGGGCAGGGCGCCCCAGAAAACAATCGAGCTGCTCACATGAGCTTCGAAAGAGACCGA
GAAGAAGACACACAAACATTCCTAATTCCTTGCCTTGGCTGGATAACACGGCTGCAAAAG
GAAATGGAGAACCGGAAGAATCATCCTTAGTTGTGTTCAGAGACAGATGTTTTCAGCGAA
TCGCTAGGCCCTAGTGCTCTATTCCACTCTGTAACACGGCAAATTAACGCTCACCAAGAA
GAGAACGCTAAGGACTTAGAATTCACGTGCTTCTCAGAGGAAATGGTTTGATGGAACTAA
TTATTAGAAGGAAGACAGGCATGAGATGAAAAGCATCCATTTTTGATGTATCCAGAACAT
AGGGAACAGGCAATAAAGCATTTGACTGGCCAACGGGACTAGACTGGGCCTGGTTTCACA
AATCCCAGCCCACCTCCTCTTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACGCTCCAGCATACTTACGTATTTACAGAAAACAGAGGGGGGAGACCCAGAGAGAGGAC
GGTGCTGAGATGTTTAGAGAGGATTTGGGAGTCGAGCTGCAGCAACATTAACGAGGAAAG
GGAGGGCAGGGCGCCCCAGAAAACAATCGAGCTGCTCACATGAGCTTCGAAAGAGACCGA
GAAGAAGACACACAAACATTCCTAATTCCTTGCCTTGGCTGGATAACACGGCTGCAAAAG
GAAATGGAGAACCGGAAGAATCATCCTTAGTTGTGTTCAGAGACAGATGTTTTCAGCGAA
TCGCTAGGCCCTAGTGCTCTATTCCACTCTGTAACACGGCAAATTAACGCTCACCAAGAA
GAGAACGCTAAGGACTTAGAATTCACGTGCTTCTCAGAGGAAATGGTTTGATGGAACTAA
TTATTAGAAGGAAGACAGGCATGAGATGAAAAGCATCCATTTTTGATGTATCCAGAACAT
AGGGAACAGGCAATAAAGCATTTGACTGGCCAACGGGACTAGACTGGGCCTGGTTTCACA
AATCCCAGCCCACCTCCTCTTCCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-244, gnl|bosTau2|chr26 (10799338-10799095)
               

               
               1-244, gnl|Hg17|chr10 (97165006-97165246)
               

               
               1-244, gnl|Mm7|chr19 (40271232-40271472)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-244, gnl|bosTau2|chr26 (10799338-10799095)
               

               
               1-244, gnl|Hg17|chr10 (97165006-97165246)
               

               
               1-244, gnl|Mm7|chr19 (40271232-40271472)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               aor (0.195274)
               

               
               hlv (0.139256)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               hlv (0.139256)

	1-244, gnl\|bosTau2\|chr26 (10799338-10799095)
	1-244, gnl\|Hg17\|chr10 (97165006-97165246)
	1-244, gnl\|Mm7\|chr19 (40271232-40271472)