Ss1.1-rcad01b_g18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTTTTTTTTTTTTTTTTTTTTGGCGCTTGACTCAGGATTTAAAAACTGGAACGGTGAAG GTGACAGCAGTCGGTTGGATGGAGCATCCCCCAAAGTTTTACAATGTGGCCGAGGACTTT GATTGTACATTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATAGTCATTCCAA GTATCATGAGATGCATTGTTACAGGAAGTCCCTGCCTTTCCAAAAGCTGCCCCGCCTCCC CCTGAGGAGAAGGGCCAGTCCTCGCCCAGGTCCACCCGAGGAGGGCAGTAGCATCGCTTT AGTGTAAATTATGTACTCCAACATTTTTTTTAATCTTCGCCTTAATACTTGGTCTTTTTG GTTGGTTTATTTTGAGGGGTCAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTTTTTTTTTTTTTTTTTTTTGGCGCTTGACTCAGGATTTAAAAACTGGAACGGTGAAG GTGACAGCAGTCGGTTGGATGGAGCATCCCCCAAAGTTTTACAATGTGGCCGAGGACTTT GATTGTACATTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATAGTCATTCCAA GTATCATGAGATGCATTGTTACAGGAAGTCCCTGCCTTTCCAAAAGCTGCCCCGCCTCCC CCTGAGGAGAAGGGCCAGTCCTCGCCCAGGTCCACCCGAGGAGGGCAGTAGCATCGCTTT AGTGTAAATTATGTACTCCAACATTTTTTTTAATCTTCGCCTTAATACTTGGTCTTTTTG GTTGGTTTATTTTGAGGGGTCAGC |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 4-143, gnl|bosTau2|chr1 (93218420-93218282) | |
| 4-143, gnl|canFam2|chr38 (5030125-5030303) | |
| 4-143, gnl|canFam2|chr6 (15434873-15434694) | |
| 4-143, gnl|danRer3|chr21 (25391586-25391423) | |
| 4-143, gnl|dasNov1|scaffold_100300 (4035-3848) | |
| 4-143, gnl|dasNov1|scaffold_100300 (3847-4036) | |
| 4-143, gnl|echTel1|scaffold_160425 (1754-1598) | |
| 4-143, gnl|echTel1|scaffold_71902 (84-250) | |
| 4-143, gnl|fr1|chrUn (208084491-208084286) | |
| 4-143, gnl|hg17|chr18 (55511261-55511432) | |
| 4-143, gnl|hg17|chr3 (177177673-177177845) | |
| 4-143, gnl|Hg17|chr7 (5340512-5340379) | |
| 4-143, gnl|loxAfr1|scaffold_86555 (9120-8950) | |
| 4-143, gnl|loxAfr1|scaffold_86555 (8949-9120) | |
| 4-143, gnl|mm7|chr16 (37592941-37592756) | |
| 4-143, gnl|mm7|chr16 (37592755-37592939) | |
| 4-143, gnl|Mm7|chr5 (141936559-141936390) | |
| 4-143, gnl|monDom2|scaffold_21 (11434229-11434050) | |
| 4-143, gnl|monDom2|scaffold_28 (23861245-23861067) | |
| 4-143, gnl|oryCun1|scaffold_139110 (9454-9290) | |
| 4-143, gnl|oryCun1|scaffold_204000 (414234-414071) | |
| 4-143, gnl|panTro1|chr17 (52410341-52410508) | |
| 4-143, gnl|panTro1|chr2 (180869764-180869936) | |
| 4-143, gnl|rheMac2|chr18 (52949807-52949967) | |
| 4-143, gnl|rheMac2|chr2 (110836836-110836667) | |
| 4-143, gnl|rn3|chr12 (12080297-12080113) | |
| 4-143, gnl|rn3|chr12 (12080112-12080295) | |
| 153-384, gnl|bosTau2|chr1 (93218295-93218056) | |
| 153-384, gnl|Hg17|chr7 (5340391-5340167) | |
| 153-384, gnl|Mm7|chr5 (141936413-141936169) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-143, gnl|bosTau2|chr1 (93218420-93218282) | |
| 4-143, gnl|canFam2|chr38 (5030125-5030303) | |
| 4-143, gnl|canFam2|chr6 (15434873-15434694) | |
| 4-143, gnl|danRer3|chr21 (25391586-25391423) | |
| 4-143, gnl|dasNov1|scaffold_100300 (4035-3848) | |
| 4-143, gnl|dasNov1|scaffold_100300 (3847-4036) | |
| 4-143, gnl|echTel1|scaffold_160425 (1754-1598) | |
| 4-143, gnl|echTel1|scaffold_71902 (84-250) | |
| 4-143, gnl|fr1|chrUn (208084491-208084286) | |
| 4-143, gnl|hg17|chr18 (55511261-55511432) | |
| 4-143, gnl|hg17|chr3 (177177673-177177845) | |
| 4-143, gnl|Hg17|chr7 (5340512-5340379) | |
| 4-143, gnl|loxAfr1|scaffold_86555 (9120-8950) | |
| 4-143, gnl|loxAfr1|scaffold_86555 (8949-9120) | |
| 4-143, gnl|mm7|chr16 (37592941-37592756) | |
| 4-143, gnl|mm7|chr16 (37592755-37592939) | |
| 4-143, gnl|Mm7|chr5 (141936559-141936390) | |
| 4-143, gnl|monDom2|scaffold_21 (11434229-11434050) | |
| 4-143, gnl|monDom2|scaffold_28 (23861245-23861067) | |
| 4-143, gnl|oryCun1|scaffold_139110 (9454-9290) | |
| 4-143, gnl|oryCun1|scaffold_204000 (414234-414071) | |
| 4-143, gnl|panTro1|chr17 (52410341-52410508) | |
| 4-143, gnl|panTro1|chr2 (180869764-180869936) | |
| 4-143, gnl|rheMac2|chr18 (52949807-52949967) | |
| 4-143, gnl|rheMac2|chr2 (110836836-110836667) | |
| 4-143, gnl|rn3|chr12 (12080297-12080113) | |
| 4-143, gnl|rn3|chr12 (12080112-12080295) | |
| 153-384, gnl|bosTau2|chr1 (93218295-93218056) | |
| 153-384, gnl|Hg17|chr7 (5340391-5340167) | |
| 153-384, gnl|Mm7|chr5 (141936413-141936169) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fty (0.17584) | |
| cag (0.151194) | |
| med (0.116252) | |
| jej (0.0989218) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| cag (0.151194) | |
| med (0.116252) | |
| jej (0.0989218) |