Non-Coding RNA Search

Ss1.1-rcad05b_d10.5

Sequence:


               
               GTTTCCAGTATATTTGAAATAGTTTTAATGCCTATGGTTAACTTTTTAATATTGTACTGC
AGAAAAGGCAGGCATACCAGTGTTATTAGAAAATGTCATACCTATTTTAGAAAAAATGTT
ATTCTATTATTCTAGGAAGTCAGCAATATTATAGTTGACTATCTTTAATATACAGGGAGG
TTTTATATTGCTATAAACGATCATACAACAAAATGGTAACTGAAGTTGCTGAGTTACTGC
AATACAGACTGGCCAGGCAAAGTAACAGAAATACTTTTGAGGTTTACCAAGAACCGTTCT
TAAAGCCCTCAGCAGGCTTCTGTGCCACTGGTGCTGTTTGACTGTGCACTGTCTCAGTGT
GGTATAGTCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTCCAGTATATTTGAAATAGTTTTAATGCCTATGGTTAACTTTTTAATATTGTACTGC
AGAAAAGGCAGGCATACCAGTGTTATTAGAAAATGTCATACCTATTTTAGAAAAAATGTT
ATTCTATTATTCTAGGAAGTCAGCAATATTATAGTTGACTATCTTTAATATACAGGGAGG
TTTTATATTGCTATAAACGATCATACAACAAAATGGTAACTGAAGTTGCTGAGTTACTGC
AATACAGACTGGCCAGGCAAAGTAACAGAAATACTTTTGAGGTTTACCAAGAACCGTTCT
TAAAGCCCTCAGCAGGCTTCTGTGCCACTGGTGCTGTTTGACTGTGCACTGTCTCAGTGT
GGTATAGTCCCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-372, gnl|bosTau2|chr12 (14807957-14807582)
               

               
               3-372, gnl|Hg17|chr13 (36482435-36482066)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-372, gnl|bosTau2|chr12 (14807957-14807582)
               

               
               3-372, gnl|Hg17|chr13 (36482435-36482066)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cag (0.151194)
               

               
               lnt (0.142308)
               

               
               sug (0.127291)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)
               

               
               lnt (0.142308)
               

               
               sug (0.127291)

	3-372, gnl\|bosTau2\|chr12 (14807957-14807582)
	3-372, gnl\|Hg17\|chr13 (36482435-36482066)