Ss1.1-rcad20b_c19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGGCGCTCGCGCCCGGCTGCAAGATGGCCGCCGCCGCCGCCGCCGCCCGGCAGCCACC GCCCCGGAGGATACTACAAGGCCTGTAGCTTCCGCCCGTGCCCGTGGACCGCCGCCGCCT CCTTACCATGAAGCCAGTGAGTCGCCGCACCCTAGACCGGATTTATTCAGCGTTGCTCCT CGCGGTCGTACTACTCTCATGGGGATATGTCATCTATGCATCAACTGTAGCTGCGCGGCG ACAGCTAAAGAAGGAACACCCAGACAAAATGTTCGGGACGAATGAACATTTGTAACGCCT CTGAATTTAATTCTATGTATATACAGTTCTTTACCTCATGCTTATCGGACTCGTCTTGAT TCACAATAAAATCCTTAATACAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGGCGCTCGCGCCCGGCTGCAAGATGGCCGCCGCCGCCGCCGCCGCCCGGCAGCCACC GCCCCGGAGGATACTACAAGGCCTGTAGCTTCCGCCCGTGCCCGTGGACCGCCGCCGCCT CCTTACCATGAAGCCAGTGAGTCGCCGCACCCTAGACCGGATTTATTCAGCGTTGCTCCT CGCGGTCGTACTACTCTCATGGGGATATGTCATCTATGCATCAACTGTAGCTGCGCGGCG ACAGCTAAAGAAGGAACACCCAGACAAAATGTTCGGGACGAATGAACATTTGTAACGCCT CTGAATTTAATTCTATGTATATACAGTTCTTTACCTCATGCTTATCGGACTCGTCTTGAT TCACAATAAAATCCTTAATACAAAAAAAAAAAAAAA |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 172-383, gnl|bosTau2|chr8 (5283124-5282916) | |
| 172-383, gnl|canFam2|chr11 (55054926-55055088) | |
| 172-383, gnl|canFam2|chr11 (52849832-52850051) | |
| 172-383, gnl|dasNov1|scaffold_182350 (757-930) | |
| 172-383, gnl|dasNov1|scaffold_26265 (11963-12125) | |
| 172-383, gnl|echTel1|scaffold_319393 (258143-257962) | |
| 172-383, gnl|echTel1|scaffold_319393 (258151-257927) | |
| 172-383, gnl|hg17|chr11 (109441316-109441503) | |
| 172-383, gnl|hg17|chr9 (32542781-32543001) | |
| 172-383, gnl|Hg17|chr9 (32542798-32543001) | |
| 172-383, gnl|loxAfr1|scaffold_18250 (24160-24342) | |
| 172-383, gnl|loxAfr1|scaffold_18250 (24142-24377) | |
| 172-383, gnl|mm7|chr4 (40408483-40408686) | |
| 172-383, gnl|Mm7|chr4 (40408500-40408686) | |
| 172-383, gnl|oryCun1|scaffold_102634 (13479-13653) | |
| 172-383, gnl|oryCun1|scaffold_102634 (13457-13689) | |
| 172-383, gnl|panTro1|chr11 (33034708-33034928) | |
| 172-383, gnl|panTro1|chr9 (111400947-111401134) | |
| 172-383, gnl|rheMac2|chr14 (108568959-108569145) | |
| 172-383, gnl|rheMac2|chr15 (44669524-44669304) | |
| 172-383, gnl|rn3|chr5 (57676973-57677129) | |
| 172-383, gnl|rn3|chr5 (57676961-57677164) | |
| 172-383, gnl|xenTro1|scaffold_153 (1162963-1163138) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 172-383, gnl|bosTau2|chr8 (5283124-5282916) | |
| 172-383, gnl|canFam2|chr11 (55054926-55055088) | |
| 172-383, gnl|canFam2|chr11 (52849832-52850051) | |
| 172-383, gnl|dasNov1|scaffold_182350 (757-930) | |
| 172-383, gnl|dasNov1|scaffold_26265 (11963-12125) | |
| 172-383, gnl|echTel1|scaffold_319393 (258143-257962) | |
| 172-383, gnl|echTel1|scaffold_319393 (258151-257927) | |
| 172-383, gnl|hg17|chr11 (109441316-109441503) | |
| 172-383, gnl|hg17|chr9 (32542781-32543001) | |
| 172-383, gnl|Hg17|chr9 (32542798-32543001) | |
| 172-383, gnl|loxAfr1|scaffold_18250 (24160-24342) | |
| 172-383, gnl|loxAfr1|scaffold_18250 (24142-24377) | |
| 172-383, gnl|mm7|chr4 (40408483-40408686) | |
| 172-383, gnl|Mm7|chr4 (40408500-40408686) | |
| 172-383, gnl|oryCun1|scaffold_102634 (13479-13653) | |
| 172-383, gnl|oryCun1|scaffold_102634 (13457-13689) | |
| 172-383, gnl|panTro1|chr11 (33034708-33034928) | |
| 172-383, gnl|panTro1|chr9 (111400947-111401134) | |
| 172-383, gnl|rheMac2|chr14 (108568959-108569145) | |
| 172-383, gnl|rheMac2|chr15 (44669524-44669304) | |
| 172-383, gnl|rn3|chr5 (57676973-57677129) | |
| 172-383, gnl|rn3|chr5 (57676961-57677164) | |
| 172-383, gnl|xenTro1|scaffold_153 (1162963-1163138) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| ebs (0.236602) | |
| fbs (0.175346) | |
| eye (0.170503) | |
| eli (0.151814) | |
| cag (0.151194) | |
| nmm (0.132802) | |
| ute (0.132784) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.236602) | |
| fbs (0.175346) | |
| eye (0.170503) | |
| eli (0.151814) | |
| cag (0.151194) | |
| nmm (0.132802) | |
| ute (0.132784) |