Ss1.1-rcad23b_i21.5
|
AATAAGAGTGACCTAGAGTCCCGTAGGGATGTGAAGAGAGAAGAGGGAGAGGCCTTTGCT
CGGGAACATGGACTTATATTCATGGAAACTTCGGCCAAAACAGCCTGCAATGTTGAAGAG
GCCTTCATTAACACAGCCAAAGAAATATATAGGAAGATCCAGCAGGGTTTATTTGATGTT
CACAATGAGGCAAATGGCATCAAGATTGGCCCCCAGCAGTGTATTTCAACATCAGTGGGA
CCCAGTGCCTCCCAGCGGAGCACTCGTGACATGGGATCTGACTCTGGCTGCTGCTGAACA
TCTGGCCTGGACTTTTTTTTCCTTCCTGGAACAGCTTCAAATCAATAGGCTTAAAGAAAG
AGGTCTTACTTGCTTTGGCTGAGAAAAGCCTCTTTTCAAGGTGTGATATTTTGCCTTTCC
ACTTAAAGACCAGGGGAGAATTTGGGCCCTCATCCTCCTGTTTTAATTTCTAAAGTGTTA
GGATCAAAGCTGATTGTCATGGTAGTTCAAAAATAAATTCTTTTATAAGCATACACAATC
TACTCCCCACCAAGAATTAGTAACAGAGGTCTAGAATATAATGCATGAGCACTTGAGATT
ACTGAGATCTGGATGACTTTTGGGTCATAGATCCTCTGTCTAGGGATTTCATTGAGTTTT
TTCACTTGCCACTTCGTAAGAGTTGTTACAGAAGGCATTCCTTCTACTTGAACTGCTCAA
GGATGCTGAATACTTCTCCACCATCCCATTACTAGTTTCTCTGTCTCAGAGTAACTACAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AATAAGAGTGACCTAGAGTCCCGTAGGGATGTGAAGAGAGAAGAGGGAGAGGCCTTTGCT
CGGGAACATGGACTTATATTCATGGAAACTTCGGCCAAAACAGCCTGCAATGTTGAAGAG
GCCTTCATTAACACAGCCAAAGAAATATATAGGAAGATCCAGCAGGGTTTATTTGATGTT
CACAATGAGGCAAATGGCATCAAGATTGGCCCCCAGCAGTGTATTTCAACATCAGTGGGA
CCCAGTGCCTCCCAGCGGAGCACTCGTGACATGGGATCTGACTCTGGCTGCTGCTGAACA
TCTGGCCTGGACTTTTTTTTCCTTCCTGGAACAGCTTCAAATCAATAGGCTTAAAGAAAG
AGGTCTTACTTGCTTTGGCTGAGAAAAGCCTCTTTTCAAGGTGTGATATTTTGCCTTTCC
ACTTAAAGACCAGGGGAGAATTTGGGCCCTCATCCTCCTGTTTTAATTTCTAAAGTGTTA
GGATCAAAGCTGATTGTCATGGTAGTTCAAAAATAAATTCTTTTATAAGCATACACAATC
TACTCCCCACCAAGAATTAGTAACAGAGGTCTAGAATATAATGCATGAGCACTTGAGATT
ACTGAGATCTGGATGACTTTTGGGTCATAGATCCTCTGTCTAGGGATTTCATTGAGTTTT
TTCACTTGCCACTTCGTAAGAGTTGTTACAGAAGGCATTCCTTCTACTTGAACTGCTCAA
GGATGCTGAATACTTCTCCACCATCCCATTACTAGTTTCTCTGTCTCAGAGTAACTACAA |
|
gi|62531013|gb|AAH92636.1| |
Protein identifier
|
gi|62531013|gb|AAH92636.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
7-121, gnl|bosTau2|chr10 (16020542-16020428) |
|
7-121, gnl|canFam2|chr15 (21504221-21504368) |
|
7-121, gnl|danRer3|chr2 (10740203-10740086) |
|
7-121, gnl|dasNov1|scaffold_81287 (2292-2144) |
|
7-121, gnl|echTel1|scaffold_307174 (18744-18892) |
|
7-121, gnl|fr1|chrUn (239914148-239914021) |
|
7-121, gnl|hg17|chr14 (21001629-21001776) |
|
7-121, gnl|Hg17|chr14 (21001768-21001654) |
|
7-121, gnl|loxAfr1|scaffold_28224 (7937-7809) |
|
7-121, gnl|mm7|chr14 (47599849-47599991) |
|
7-121, gnl|Mm7|chr14 (47599983-47599869) |
|
7-121, gnl|monDom2|scaffold_12 (29045648-29045503) |
|
7-121, gnl|oryCun1|scaffold_104876 (1523-1376) |
|
7-121, gnl|panTro1|chr15 (19918584-19918731) |
|
7-121, gnl|rheMac2|chr7 (84188912-84189059) |
|
7-121, gnl|rn3|chr15 (27727529-27727671) |
|
7-121, gnl|tetNig1|chrUn_random (90511522-90511403) |
| |
|
449-780, gnl|bosTau2|chr22 (23197942-23197610) |
|
449-780, gnl|Hg17|chr14 (20998986-20998024) |
| |
|
450-779, gnl|bosTau2|chr10 (16018787-16018458) |
|
450-779, gnl|Hg17|chr14 (20998985-20998025) |
|
450-779, gnl|Mm7|chr14 (47597174-47596592) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
7-121, gnl|bosTau2|chr10 (16020542-16020428) |
|
7-121, gnl|canFam2|chr15 (21504221-21504368) |
|
7-121, gnl|danRer3|chr2 (10740203-10740086) |
|
7-121, gnl|dasNov1|scaffold_81287 (2292-2144) |
|
7-121, gnl|echTel1|scaffold_307174 (18744-18892) |
|
7-121, gnl|fr1|chrUn (239914148-239914021) |
|
7-121, gnl|hg17|chr14 (21001629-21001776) |
|
7-121, gnl|Hg17|chr14 (21001768-21001654) |
|
7-121, gnl|loxAfr1|scaffold_28224 (7937-7809) |
|
7-121, gnl|mm7|chr14 (47599849-47599991) |
|
7-121, gnl|Mm7|chr14 (47599983-47599869) |
|
7-121, gnl|monDom2|scaffold_12 (29045648-29045503) |
|
7-121, gnl|oryCun1|scaffold_104876 (1523-1376) |
|
7-121, gnl|panTro1|chr15 (19918584-19918731) |
|
7-121, gnl|rheMac2|chr7 (84188912-84189059) |
|
7-121, gnl|rn3|chr15 (27727529-27727671) |
|
7-121, gnl|tetNig1|chrUn_random (90511522-90511403) |
| |
|
449-780, gnl|bosTau2|chr22 (23197942-23197610) |
|
449-780, gnl|Hg17|chr14 (20998986-20998024) |
| |
|
450-779, gnl|bosTau2|chr10 (16018787-16018458) |
|
450-779, gnl|Hg17|chr14 (20998985-20998025) |
|
450-779, gnl|Mm7|chr14 (47597174-47596592) |
|
cte (0.58548) |
|
cag (0.151194) |
|
lnt (0.142308) |
|
ecc (0.115035) |
|
cty (0.10408) |
|
cte (0.58548) |
|
cag (0.151194) |
|
lnt (0.142308) |
|
ecc (0.115035) |
|
cty (0.10408) |