Non-Coding RNA Search

Ss1.1-rcad26b_k17.5

Sequence:


               
               TCCCACCTCCTGCAGGACACTTCCCAGCAGCTGGTGGCCTTGAAGCCCTGGATCACCCGC
CGGAATTTCTCCCGTTGCCTGGAGGTACTGGAGAGCACAGAACTAAAATGCTTCCACCAT
TGCAGAGAGTCCTCTTGGACAGGGCTGCCGCAACACACAGTGAGAGCTCACTGTGAATGG
AGCTGTTTGGGGCCCCGAGTCTGTGCTGAGCCCTGAGCATGGGCCTTCACTGCCTGGTGC
CTGCGCCGGAGGAGGAGGAGACGGAGGATGCCCTGCCCCGGGGAGCGGAGGAAGACGCCG
AGGCCCAGAGAGAGGAGTCACCTGCCAGAGGACACAGAGCTGGAACTTGGAGGAAATCAG
TTAGAGACTGGTCCCTTCCTTGGCCACGCTGCCCCTGTTACTGTCTCCCCAGGATGGAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCACCTCCTGCAGGACACTTCCCAGCAGCTGGTGGCCTTGAAGCCCTGGATCACCCGC
CGGAATTTCTCCCGTTGCCTGGAGGTACTGGAGAGCACAGAACTAAAATGCTTCCACCAT
TGCAGAGAGTCCTCTTGGACAGGGCTGCCGCAACACACAGTGAGAGCTCACTGTGAATGG
AGCTGTTTGGGGCCCCGAGTCTGTGCTGAGCCCTGAGCATGGGCCTTCACTGCCTGGTGC
CTGCGCCGGAGGAGGAGGAGACGGAGGATGCCCTGCCCCGGGGAGCGGAGGAAGACGCCG
AGGCCCAGAGAGAGGAGTCACCTGCCAGAGGACACAGAGCTGGAACTTGGAGGAAATCAG
TTAGAGACTGGTCCCTTCCTTGGCCACGCTGCCCCTGTTACTGTCTCCCCAGGATGGAGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               89-420, gnl|bosTau2|chr18 (48625497-48625838)
               

               
               89-420, gnl|Hg17|chr19 (54680897-54681208)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-420, gnl|bosTau2|chr18 (48625497-48625838)
               

               
               89-420, gnl|Hg17|chr19 (54680897-54681208)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               fty (0.17584)
               

               
               nje (0.16592)
               

               
               cag (0.151194)
               

               
               nmm (0.132802)
               

               
               eep (0.122564)
               

               
               cly (0.120642)
               

               
               jca (0.11396)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               nje (0.16592)
               

               
               cag (0.151194)
               

               
               nmm (0.132802)
               

               
               eep (0.122564)
               

               
               cly (0.120642)
               

               
               jca (0.11396)

	89-420, gnl\|bosTau2\|chr18 (48625497-48625838)
	89-420, gnl\|Hg17\|chr19 (54680897-54681208)

	fty (0.17584)
	nje (0.16592)
	cag (0.151194)
	nmm (0.132802)
	eep (0.122564)
	cly (0.120642)
	jca (0.11396)