Non-Coding RNA Search

Ss1.1-rcad34b_b8.5

Sequence:


               
               CCAAGAGGAGCAGGAGCACCAAGATGCAGGCCTGTGAGGCTGAAAACCTCCTGCGTGGGA
TCTTGGGCAGAGTGCGGGCACTCCCCCGTCTCCAGGGACTCCGGGGGCTGCCCGCACCTG
CCAGCAAGCAGGAGGCAGGGCCTGGGATGGAAGGGAGCTTGCCCTGGTCCTTGGCAGCTA
GTCAAGAAGGATTTGCACGGGCCTGGGAATCTGAAGAATGTGCAGAACGTGTCCAGTCTG
GCTCTGAGCGCCCAGGGCATGTTCTCCAGCCTGGTCTCAGGGTGGTAACTGCATGCTCAC
CAGCCCCGATCTGGCCAATCAGATGCTCAGTTCTGCTCTGTGGTTTCTCTCTCCCAACAG
CTTACAGGACGGGAAAGAATACCTATTCCAGGCCAAGGACGAGGCAGAGATGAGCTCGTG
GCTGCGGGTGGTGAACGCGGCCATTGCCACTGCCTCCTCTGCCTCTGGAGAGCCTGAAGA
GCCAGCGGTGCCCAGTGCCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCGGTATC
ACCGGTCGGGGCTGAGGGACCTGTCGTACTTCGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAAGAGGAGCAGGAGCACCAAGATGCAGGCCTGTGAGGCTGAAAACCTCCTGCGTGGGA
TCTTGGGCAGAGTGCGGGCACTCCCCCGTCTCCAGGGACTCCGGGGGCTGCCCGCACCTG
CCAGCAAGCAGGAGGCAGGGCCTGGGATGGAAGGGAGCTTGCCCTGGTCCTTGGCAGCTA
GTCAAGAAGGATTTGCACGGGCCTGGGAATCTGAAGAATGTGCAGAACGTGTCCAGTCTG
GCTCTGAGCGCCCAGGGCATGTTCTCCAGCCTGGTCTCAGGGTGGTAACTGCATGCTCAC
CAGCCCCGATCTGGCCAATCAGATGCTCAGTTCTGCTCTGTGGTTTCTCTCTCCCAACAG
CTTACAGGACGGGAAAGAATACCTATTCCAGGCCAAGGACGAGGCAGAGATGAGCTCGTG
GCTGCGGGTGGTGAACGCGGCCATTGCCACTGCCTCCTCTGCCTCTGGAGAGCCTGAAGA
GCCAGCGGTGCCCAGTGCCACCCGGGGCATGACCCGGGCCATGACCATGCCCCCGGTATC
ACCGGTCGGGGCTGAGGGACCTGTCGTACTTCGCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-404, gnl|bosTau2|chr29 (36822859-36823268)
               

               
               4-404, gnl|Hg17|chr11 (66210862-66210444)
               

               
               4-404, gnl|Mm7|chr19 (4645613-4645998)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-404, gnl|bosTau2|chr29 (36822859-36823268)
               

               
               4-404, gnl|Hg17|chr11 (66210862-66210444)
               

               
               4-404, gnl|Mm7|chr19 (4645613-4645998)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cag (0.151194)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)
               

               
               eep (0.122564)

	4-404, gnl\|bosTau2\|chr29 (36822859-36823268)
	4-404, gnl\|Hg17\|chr11 (66210862-66210444)
	4-404, gnl\|Mm7\|chr19 (4645613-4645998)