Ss1.1-rcad35b_l22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAAATCTAAGAGGTTCTTACTATCGCTTTTTCAATCCTATATAAGGTAGGTCAGCAAG ACAGAAAAGGCGCCTCTGTTTTGTGCTCCTTCAGCTCTTTTTCCTGATTCTTCTTGGAGG AAAATCGAAATCGGTGGAAAATGAGCATCACAGATGTCCTCAGTGCTGACGACATTGCAG CAGCCTTGCTGGAGTGCCAAGACCCAGATACTTTTGAACCCCAAAAATTCTTCCAGACAT CGGGCCTGGCCAAGATGTCAGCCAGTCAGGTGAAGGATGTTTTTCGTTTCATAGACAACG ACCAGAGTGGCTACCTGGATGAAGAAGAGCTTAAGTTTTTCCTCCAGAAGTTTGAGAGCG GTGCTAGAGAACTGACCGAGTCAGAAACCAAGTCCTTGATGGCGGCTGCAGACAACGACG GCGATGGGAAAATCGGGGCTGATGAATTCCAGGAAATGGTACATTCTTAAAGGGCCCAGG CTGTGGCGATAGAATCAGCTGGAAGGCCTCCAAAGCCCCAGGAATTGGGAAACCCTACAT CCTCTCCCTCATTTATTTATTAATTTCCCCTGGAAACGCTTCTGCAATTTCCCCTTTGTC TTAGTCTGGTCATACAACAGCCCCCCCCACCCCCGACTCTCTGGTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAAATCTAAGAGGTTCTTACTATCGCTTTTTCAATCCTATATAAGGTAGGTCAGCAAG ACAGAAAAGGCGCCTCTGTTTTGTGCTCCTTCAGCTCTTTTTCCTGATTCTTCTTGGAGG AAAATCGAAATCGGTGGAAAATGAGCATCACAGATGTCCTCAGTGCTGACGACATTGCAG CAGCCTTGCTGGAGTGCCAAGACCCAGATACTTTTGAACCCCAAAAATTCTTCCAGACAT CGGGCCTGGCCAAGATGTCAGCCAGTCAGGTGAAGGATGTTTTTCGTTTCATAGACAACG ACCAGAGTGGCTACCTGGATGAAGAAGAGCTTAAGTTTTTCCTCCAGAAGTTTGAGAGCG GTGCTAGAGAACTGACCGAGTCAGAAACCAAGTCCTTGATGGCGGCTGCAGACAACGACG GCGATGGGAAAATCGGGGCTGATGAATTCCAGGAAATGGTACATTCTTAAAGGGCCCAGG CTGTGGCGATAGAATCAGCTGGAAGGCCTCCAAAGCCCCAGGAATTGGGAAACCCTACAT CCTCTCCCTCATTTATTTATTAATTTCCCCTGGAAACGCTTCTGCAATTTCCCCTTTGTC TTAGTCTGGTCATACAACAGCCCCCCCCACCCCCGACTCTCTGGTGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-136, gnl|bosTau2|chr25 (33558092-33558228) | |
| 1-136, gnl|canFam2|chr6 (14315574-14316110) | |
| 1-136, gnl|dasNov1|scaffold_33195 (15210-14678) | |
| 1-136, gnl|echTel1|scaffold_241482 (4-577) | |
| 1-136, gnl|hg17|chr7 (5692653-5693179) | |
| 1-136, gnl|Hg17|chr7 (97265133-97264997) | |
| 1-136, gnl|loxAfr1|scaffold_15912 (51392-50822) | |
| 1-136, gnl|mm7|chr5 (143054747-143054346) | |
| 1-136, gnl|Mm7|chr5 (143054699-143054573) | |
| 1-136, gnl|monDom2|scaffold_19 (43849836-43849216) | |
| 1-136, gnl|panTro1|chr6 (6134852-6135378) | |
| 1-136, gnl|rn3|chr12 (10948548-10948948) | |
| 332-444, gnl|bosTau2|chr25 (36625155-36625267) | |
| 332-444, gnl|danRer3|chr12 (12286737-12286611) | |
| 332-444, gnl|dasNov1|scaffold_33195 (13209-13077) | |
| 332-444, gnl|echTel1|scaffold_241482 (2388-2519) | |
| 332-444, gnl|fr1|chrUn (189920548-189920415) | |
| 332-444, gnl|galGal2|chr14 (3228150-3228024) | |
| 332-444, gnl|hg17|chr7 (5696746-5696878) | |
| 332-444, gnl|Hg17|chr7 (5696759-5696871) | |
| 332-444, gnl|mm7|chr5 (143051980-143051848) | |
| 332-444, gnl|Mm7|chr5 (143051965-143051853) | |
| 332-444, gnl|monDom2|scaffold_19 (43847269-43847143) | |
| 332-444, gnl|oryCun1|scaffold_154977 (4687-4819) | |
| 332-444, gnl|panTro1|chr6 (6138939-6139071) | |
| 332-444, gnl|rheMac2|chr10 (80712406-80712293) | |
| 332-444, gnl|rn3|chr12 (10951577-10951709) | |
| 332-444, gnl|tetNig1|chr2 (3921928-3922044) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-136, gnl|bosTau2|chr25 (33558092-33558228) | |
| 1-136, gnl|canFam2|chr6 (14315574-14316110) | |
| 1-136, gnl|dasNov1|scaffold_33195 (15210-14678) | |
| 1-136, gnl|echTel1|scaffold_241482 (4-577) | |
| 1-136, gnl|hg17|chr7 (5692653-5693179) | |
| 1-136, gnl|Hg17|chr7 (97265133-97264997) | |
| 1-136, gnl|loxAfr1|scaffold_15912 (51392-50822) | |
| 1-136, gnl|mm7|chr5 (143054747-143054346) | |
| 1-136, gnl|Mm7|chr5 (143054699-143054573) | |
| 1-136, gnl|monDom2|scaffold_19 (43849836-43849216) | |
| 1-136, gnl|panTro1|chr6 (6134852-6135378) | |
| 1-136, gnl|rn3|chr12 (10948548-10948948) | |
| 332-444, gnl|bosTau2|chr25 (36625155-36625267) | |
| 332-444, gnl|danRer3|chr12 (12286737-12286611) | |
| 332-444, gnl|dasNov1|scaffold_33195 (13209-13077) | |
| 332-444, gnl|echTel1|scaffold_241482 (2388-2519) | |
| 332-444, gnl|fr1|chrUn (189920548-189920415) | |
| 332-444, gnl|galGal2|chr14 (3228150-3228024) | |
| 332-444, gnl|hg17|chr7 (5696746-5696878) | |
| 332-444, gnl|Hg17|chr7 (5696759-5696871) | |
| 332-444, gnl|mm7|chr5 (143051980-143051848) | |
| 332-444, gnl|Mm7|chr5 (143051965-143051853) | |
| 332-444, gnl|monDom2|scaffold_19 (43847269-43847143) | |
| 332-444, gnl|oryCun1|scaffold_154977 (4687-4819) | |
| 332-444, gnl|panTro1|chr6 (6138939-6139071) | |
| 332-444, gnl|rheMac2|chr10 (80712406-80712293) | |
| 332-444, gnl|rn3|chr12 (10951577-10951709) | |
| 332-444, gnl|tetNig1|chr2 (3921928-3922044) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cag (0.151194) | |
| nmm (0.132802) |