Non-Coding RNA Search

Ss1.1-rcbe01_e18.5

Sequence:


               
               TGATGTATTATCCAAAAGTGATAAAAGAGTATGTTTGGTGATGGAAACCGTTACACGTCT
TGAGATTTTTGTATTTGGGTCAGAAAGATACAGGCTTGGCTAAATTAGACATGTGGGTAT
GGCTTAATTTCTAAATCAAGAAAATGTAAAAAAAAATGACCTAACTCATATTTTGACGGA
ACCATTAGCCAGTAGTAACCAGGCTGACCCGCCTCATTGTATATACTGCCAGCCCTAAAG
ATGGTTATTTAATAAGGTTATTGTGAGTGAAGACAGCTATAAATGGTGCCATATTACAAA
AATGCCAAAGTAGAATGTTTTCTTAGTAATGTCTGTGGAAACAAATACTGAAGGCAGCAG
CTGAGCTTAATAATCTTACTCCACAAGTCACAGTGAGGAATTTGAAGTCCTGGCTTGGGT
TGCTGAATGTTGGGCTCCATACATAAGTCATTTGACCCTTGCTCTTTTCCATGTCTTTAT
TTATAAAATGAGAATAATTTCTGTTCCTTGCTGCTTTGTGAGTTTGTACTGACTTTGGAA
ATTTAAAAAATACATAATTCACAAATGTAAGTATTCTGAACATTAAAAAAAAAAGATTTT
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGATGTATTATCCAAAAGTGATAAAAGAGTATGTTTGGTGATGGAAACCGTTACACGTCT
TGAGATTTTTGTATTTGGGTCAGAAAGATACAGGCTTGGCTAAATTAGACATGTGGGTAT
GGCTTAATTTCTAAATCAAGAAAATGTAAAAAAAAATGACCTAACTCATATTTTGACGGA
ACCATTAGCCAGTAGTAACCAGGCTGACCCGCCTCATTGTATATACTGCCAGCCCTAAAG
ATGGTTATTTAATAAGGTTATTGTGAGTGAAGACAGCTATAAATGGTGCCATATTACAAA
AATGCCAAAGTAGAATGTTTTCTTAGTAATGTCTGTGGAAACAAATACTGAAGGCAGCAG
CTGAGCTTAATAATCTTACTCCACAAGTCACAGTGAGGAATTTGAAGTCCTGGCTTGGGT
TGCTGAATGTTGGGCTCCATACATAAGTCATTTGACCCTTGCTCTTTTCCATGTCTTTAT
TTATAAAATGAGAATAATTTCTGTTCCTTGCTGCTTTGTGAGTTTGTACTGACTTTGGAA
ATTTAAAAAATACATAATTCACAAATGTAAGTATTCTGAACATTAAAAAAAAAAGATTTT
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-594, gnl|bosTau2|chr24 (43739949-43739367)
               

               
               1-594, gnl|Hg17|chr2 (32958041-32958619)
               

               
               1-594, gnl|Mm7|chr17 (73153801-73154383)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-594, gnl|bosTau2|chr24 (43739949-43739367)
               

               
               1-594, gnl|Hg17|chr2 (32958041-32958619)
               

               
               1-594, gnl|Mm7|chr17 (73153801-73154383)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbe (0.239234)
               

               
               sin (0.174948)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               sin (0.174948)

	1-594, gnl\|bosTau2\|chr24 (43739949-43739367)
	1-594, gnl\|Hg17\|chr2 (32958041-32958619)
	1-594, gnl\|Mm7\|chr17 (73153801-73154383)