Non-Coding RNA Search

Ss1.1-rcbe03_f9.5

Sequence:


               
               GTGAATACTCGGGCTGGACCCTCTCAACACAGCAGCCCAGCAGTCTCAGATTCACTCCCA
AGCAATAGCTTAAAGAAATCTTCTGCTGAACTGAAAAAAATATTAGCCAATGGCCAGATG
AATGAACAAGACATACGGTATCGAGACACTCTTGGTCATGGCAATGGAGGCACAGTCTAC
AAAGCATATCATGTTCCAAGTGGGAAAATATTAGCTGTAAAGGTCATACTACTAGATATT
ACACTGGAGCTTCAGAAGCAAATTATGTCTGAATTGGAAATTCTCTATAAGTGTGATTCA
TCATATATCATAGGGTTTTATGGTGCATTTTTTGTGGAAAACAGGATTTCAATATGTACA
GAATTCATGGATGGAGGATCTTTGGATGTATATAGAAAGATTCCAGAGCATGTCCTTGGA
AGAATTGCAGTGGCGGTTGTTAAAGGCCTTACTTATTTGTGGAGTTTAAAGATTTTACAT
AGAGATGTGAAGCCCTCCAATATGCTAGTAAACACAAGGGGACAGGTCAAGCTGTGTGAC
TTTGGAGTTAGCACTCAGCTAGTGAATTCTATAGCCAAGACGTATGTTGGAACAAATGCT
TATATGGCGCCTGAAAGAATTTCAGGGGAGCAGTATGGAATCCATTCTGATGTCTGGAGC
TTAGGAATCTCTTTCATGGAGCTTGCTCTTGGGAGGTTTCCATATCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAATACTCGGGCTGGACCCTCTCAACACAGCAGCCCAGCAGTCTCAGATTCACTCCCA
AGCAATAGCTTAAAGAAATCTTCTGCTGAACTGAAAAAAATATTAGCCAATGGCCAGATG
AATGAACAAGACATACGGTATCGAGACACTCTTGGTCATGGCAATGGAGGCACAGTCTAC
AAAGCATATCATGTTCCAAGTGGGAAAATATTAGCTGTAAAGGTCATACTACTAGATATT
ACACTGGAGCTTCAGAAGCAAATTATGTCTGAATTGGAAATTCTCTATAAGTGTGATTCA
TCATATATCATAGGGTTTTATGGTGCATTTTTTGTGGAAAACAGGATTTCAATATGTACA
GAATTCATGGATGGAGGATCTTTGGATGTATATAGAAAGATTCCAGAGCATGTCCTTGGA
AGAATTGCAGTGGCGGTTGTTAAAGGCCTTACTTATTTGTGGAGTTTAAAGATTTTACAT
AGAGATGTGAAGCCCTCCAATATGCTAGTAAACACAAGGGGACAGGTCAAGCTGTGTGAC
TTTGGAGTTAGCACTCAGCTAGTGAATTCTATAGCCAAGACGTATGTTGGAACAAATGCT
TATATGGCGCCTGAAAGAATTTCAGGGGAGCAGTATGGAATCCATTCTGATGTCTGGAGC
TTAGGAATCTCTTTCATGGAGCTTGCTCTTGGGAGGTTTCCATATCCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|12851379|dbj|BAB29020.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|12851379|dbj|BAB29020.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               219-701, gnl|bosTau2|chr17 (17290090-17289593)
               

               
               219-701, gnl|Hg17|chr8 (30005062-30005562)
               

               
               219-701, gnl|Mm7|chr9 (64242583-64219706)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               219-701, gnl|bosTau2|chr17 (17290090-17289593)
               

               
               219-701, gnl|Hg17|chr8 (30005062-30005562)
               

               
               219-701, gnl|Mm7|chr9 (64242583-64219706)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               cbe (0.239234)
               

               
               mcp (0.170648)
               

               
               fhi (0.169578)
               

               
               cov (0.132153)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               mcp (0.170648)
               

               
               fhi (0.169578)
               

               
               cov (0.132153)

	219-701, gnl\|bosTau2\|chr17 (17290090-17289593)
	219-701, gnl\|Hg17\|chr8 (30005062-30005562)
	219-701, gnl\|Mm7\|chr9 (64242583-64219706)