Non-Coding RNA Search

Ss1.1-rcbe04_b1.5

Sequence:


               
               ATCGCAGGGAGAAGGTGTGCATTGTTTCCTGTCCCCGGACTAACACTTTCCTGTCACCAT
GTAGGTGCATATATGAAAGATAATTCAAGGAAACATCCTCCTCAAATACTATTCAGAAAG
CCATTTGACATAGAACAGAATCGAACTGAAAAGACTCTAATTTGGAATTCACCGAATACA
TTCAAAGTTTTAGAAAGAGAAATAAAAATGAGGGGAAAACCCACCTTTTTTTGTGTTTCT
GAAAACAATAGTTAAGGTCAGAACTGTTTTAAAACAAAAAGCACTGCTAAAATACAGGAT
TCAGAGAAACATAGTATTTTTGTACAGTATCTTCCAAAATGTTCAGATCTCTCTCTACAC
CTCTTTACAATGTAATGTCTCTAAGTAACTGGTTTCCCAATAAATTGATTTTGATGCCGC
TAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCGCAGGGAGAAGGTGTGCATTGTTTCCTGTCCCCGGACTAACACTTTCCTGTCACCAT
GTAGGTGCATATATGAAAGATAATTCAAGGAAACATCCTCCTCAAATACTATTCAGAAAG
CCATTTGACATAGAACAGAATCGAACTGAAAAGACTCTAATTTGGAATTCACCGAATACA
TTCAAAGTTTTAGAAAGAGAAATAAAAATGAGGGGAAAACCCACCTTTTTTTGTGTTTCT
GAAAACAATAGTTAAGGTCAGAACTGTTTTAAAACAAAAAGCACTGCTAAAATACAGGAT
TCAGAGAAACATAGTATTTTTGTACAGTATCTTCCAAAATGTTCAGATCTCTCTCTACAC
CTCTTTACAATGTAATGTCTCTAAGTAACTGGTTTCCCAATAAATTGATTTTGATGCCGC
TAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               6-421, gnl|bosTau2|chr11 (48870429-48870859)
               

               
               6-421, gnl|Hg17|chr2 (69607005-69606568)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-421, gnl|bosTau2|chr11 (48870429-48870859)
               

               
               6-421, gnl|Hg17|chr2 (69607005-69606568)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.314416)
               

               
               cbe (0.239234)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               cbe (0.239234)

	6-421, gnl\|bosTau2\|chr11 (48870429-48870859)
	6-421, gnl\|Hg17\|chr2 (69607005-69606568)