Ss1.1-rcbe05_m11.5
|
GTGCTTTTCACCCATCATCCCTCCTGTTAGTTTCAGCTTCGCCTTCACTAGGAAAGCCCC
ACTTTAACACCTAGAATGACCTCTGAAGACGCCAGCATCTTTGACACCTCCATGCTCCCA
TTGCTTCCCCTACTGTGGATGTCCATCTGTCTGTCTGTCTGCCTGGACGTGGCCCTACCT
CCCCTAAACGAATGAACTCTCGCAAGCAAGGACCACGTCATGCATGTGTTTCTCTCTGAA
ACTTCAAATAGGAGTCAGTTAGAAGGTATTTGTTGAATTCAGAGAGTTTTTTGGGGTGGT
GAGACAAAAGTGTCTTATGCACACATAATTAAGTCATATGCTGTTCTCCTCCTACCTTCA
GAATAACTAGGTCTGGTCAGTAACACTTGATTTCATGGGATTCCTTACCATATGCAGCGT
TTAACTGCATTTCCACAAAATCATGTGTGTCTAAACCTGTGTAATTATAATTTTAAAGGT
CTCCCTGTCAGTTTCTCCCTGTCATTTCTGCGGACAATGTAGAAATGGATAGTTTTAAAT
AATATAAAATATTTGATGAGTTGAATAATTAAGTACGTGGCAAGTTTATAGTATTCCTCA
TTTTAGGGTATGTAGTAAAATTATGCCACTGTTTATATGGTACCATACAAATGTACATTT
TACCCACTTGAGTGTCTTATTATTTCTTAATTCTGAGGAATACGTGGTCATTTTTCTCTC
CCCACACTTTACCCCCCAACAGGCTGCTGTGATTGTCAACAGCAGCAGGCTCCACTTTGA
AGGTTTGATAAAAGCAGATGAAGATGCTTAAAGATGTCTGTTTGCTGAAAATATCTGGTA
ACAAACAGGAATATATGTGAGTAAATAGAGTGCATTATTCTGGTTTTTAAAATAAATGTT
TTAAAACGCCTAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GTGCTTTTCACCCATCATCCCTCCTGTTAGTTTCAGCTTCGCCTTCACTAGGAAAGCCCC
ACTTTAACACCTAGAATGACCTCTGAAGACGCCAGCATCTTTGACACCTCCATGCTCCCA
TTGCTTCCCCTACTGTGGATGTCCATCTGTCTGTCTGTCTGCCTGGACGTGGCCCTACCT
CCCCTAAACGAATGAACTCTCGCAAGCAAGGACCACGTCATGCATGTGTTTCTCTCTGAA
ACTTCAAATAGGAGTCAGTTAGAAGGTATTTGTTGAATTCAGAGAGTTTTTTGGGGTGGT
GAGACAAAAGTGTCTTATGCACACATAATTAAGTCATATGCTGTTCTCCTCCTACCTTCA
GAATAACTAGGTCTGGTCAGTAACACTTGATTTCATGGGATTCCTTACCATATGCAGCGT
TTAACTGCATTTCCACAAAATCATGTGTGTCTAAACCTGTGTAATTATAATTTTAAAGGT
CTCCCTGTCAGTTTCTCCCTGTCATTTCTGCGGACAATGTAGAAATGGATAGTTTTAAAT
AATATAAAATATTTGATGAGTTGAATAATTAAGTACGTGGCAAGTTTATAGTATTCCTCA
TTTTAGGGTATGTAGTAAAATTATGCCACTGTTTATATGGTACCATACAAATGTACATTT
TACCCACTTGAGTGTCTTATTATTTCTTAATTCTGAGGAATACGTGGTCATTTTTCTCTC
CCCACACTTTACCCCCCAACAGGCTGCTGTGATTGTCAACAGCAGCAGGCTCCACTTTGA
AGGTTTGATAAAAGCAGATGAAGATGCTTAAAGATGTCTGTTTGCTGAAAATATCTGGTA
ACAAACAGGAATATATGTGAGTAAATAGAGTGCATTATTCTGGTTTTTAAAATAAATGTT
TTAAAACGCCTAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
cbe (0.478469) |
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gul (0.177588) |
|
lin (0.145603) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
sug (0.127291) |
|
cbe (0.478469) |
|
gul (0.177588) |
|
lin (0.145603) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
sug (0.127291) |